CAZyme3D

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Entry ID

Information for CAZyme ID: ARM75497.1

Basic Information

GenBank IDARM75497.1
FamilyGH170
Sequence Length236
UniProt IDA0A1W6JZ24(100,100)Download
Average pLDDT?95.39
CAZy50 ID174521
CAZy50 RepNo, AWR96910.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID282676
KingdomArchaea
PhylumThermoproteota
ClassThermoprotei
OrderSulfolobales
FamilySulfolobaceae
GenusAcidianus
SpeciesAcidianus manzaensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MASIGFSVFP  GWKEIFERQK  EMIIKGENLG  YTEIFFGIGR  GVHTKSTLEA  ASNAKQLLKI60
ANKLGYYSFV  DINPDILNEL  GASPRNMGIF  KEIGFSAVRV  DYGFKIDDIL  KIQDIGIEIN120
PYEFPLDRLE  YFLDKIDDPE  RVKACHNYYP  SKGSGISLKE  LIEKSKPFVE  LDIPVAAFIS180
VPSVKSDTTV  EELREKDPSE  SAKILFDTGV  ISRVLIGDAN  PTDEEMEKLS  SIKITF236

Predicted 3D structure by AlphaFold2 with pLDDT = 95.39 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH170(4-231)

MASIGFSVFP  GWKEIFERQK  EMIIKGENLG  YTEIFFGIGR  GVHTKSTLEA  ASNAKQLLKI60
ANKLGYYSFV  DINPDILNEL  GASPRNMGIF  KEIGFSAVRV  DYGFKIDDIL  KIQDIGIEIN120
PYEFPLDRLE  YFLDKIDDPE  RVKACHNYYP  SKGSGISLKE  LIEKSKPFVE  LDIPVAAFIS180
VPSVKSDTTV  EELREKDPSE  SAKILFDTGV  ISRVLIGDAN  PTDEEMEKLS  SIKITF236

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help