CAZyme3D

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Entry ID

Information for CAZyme ID: ARD84407.1

Basic Information

GenBank IDARD84407.1
FamilyGH15
Sequence Length607
UniProt IDA0A1V0N2T5(100,100)Download
Average pLDDT?93.12
CAZy50 ID49096
CAZy50 RepNo, BAB60480.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID74969
KingdomArchaea
PhylumCandidatus Thermoplasmatota
ClassThermoplasmata
OrderThermoplasmatales
FamilyFerroplasmaceae
GenusFerroplasma
SpeciesFerroplasma acidiphilum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MGTYRGLYDL  HDAYRSDYLK  IANHGFIANN  RTAALVGIDG  TIDWACLPNF  NSNPVFDSIL60
DARNGGYFKT  SPVMESNVNQ  YYEESTNILI  TEFVNNNQVI  LRLTDFLPTS  SYSTITFPEI120
HRLIEAPYSD  VEVSIDIKSH  FNFGSGKTNI  TRDRNGYIFS  CTDDTLGIST  NLKLKKGNGN180
VYSRIKVEKG  SHEWIVVLSG  VRQIGNVRQY  ESYTRLEETR  NYWSAWAGKI  NYSGLYYDHV240
IRSALTLRGL  FYDPTGMMVA  APTTSLPEII  GGERNWDYRY  TWIRDTAYVV  EALSLIGLKD300
VATKFLYDIM  SIVQKDKKVK  TIYPVNGDSK  LEEKKVNLSG  YMDSIPVRIG  NEASEQLQID360
QYGSIVNAVF  RFHEAGGLVT  TYLWDFLIEI  LDTLKDIWKL  PDSSIWEFRS  EPKHYLYSKL420
ISWSAFNRAI  KMGRELGYSA  PYRTWHKIRE  EIKNEIMEKG  YNPDVKAFTQ  YYGSDQMDAS480
VLRMPLTGII  SAKDPRFVST  LARVEAELKN  PCGMFIRYHS  DDGLKGHDNA  FLLLSFWYVE540
DLILSGRIME  AKETFENILD  HSNHLMLFSE  EINFNDCREM  LGNFPQAITH  LGVIRAAIKL600
DEALRGK607

Predicted 3D structure by AlphaFold2 with pLDDT = 93.12 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH15(238-597)

MGTYRGLYDL  HDAYRSDYLK  IANHGFIANN  RTAALVGIDG  TIDWACLPNF  NSNPVFDSIL60
DARNGGYFKT  SPVMESNVNQ  YYEESTNILI  TEFVNNNQVI  LRLTDFLPTS  SYSTITFPEI120
HRLIEAPYSD  VEVSIDIKSH  FNFGSGKTNI  TRDRNGYIFS  CTDDTLGIST  NLKLKKGNGN180
VYSRIKVEKG  SHEWIVVLSG  VRQIGNVRQY  ESYTRLEETR  NYWSAWAGKI  NYSGLYYDHV240
IRSALTLRGL  FYDPTGMMVA  APTTSLPEII  GGERNWDYRY  TWIRDTAYVV  EALSLIGLKD300
VATKFLYDIM  SIVQKDKKVK  TIYPVNGDSK  LEEKKVNLSG  YMDSIPVRIG  NEASEQLQID360
QYGSIVNAVF  RFHEAGGLVT  TYLWDFLIEI  LDTLKDIWKL  PDSSIWEFRS  EPKHYLYSKL420
ISWSAFNRAI  KMGRELGYSA  PYRTWHKIRE  EIKNEIMEKG  YNPDVKAFTQ  YYGSDQMDAS480
VLRMPLTGII  SAKDPRFVST  LARVEAELKN  PCGMFIRYHS  DDGLKGHDNA  FLLLSFWYVE540
DLILSGRIME  AKETFENILD  HSNHLMLFSE  EINFNDCREM  LGNFPQAITH  LGVIRAAIKL600
DEALRGK607

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help