Information for CAZyme ID: ARC57985.1
Basic Information
| GenBank ID | ARC57985.1 |
| Family | GH78 |
| Sequence Length | 761 |
| UniProt ID | A0A2R2WC53(100,100) |
| Average pLDDT? | 95.85 |
| CAZy50 ID | 2599 |
| CAZy50 Rep | No, SDS97270.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1446794 |
| Kingdom | Bacteria |
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Frondihabitans |
| Species | Frondihabitans sp. 762G35 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTWHAQMISP DQDFDGAPLL RREFTLDDGH GDVATATLVV SAYGVLEAHL GGKPVSDDLL | 60 |
| APGWSSYEWR QRFARYDVTA LVGGTSVLGI ALGNGWYRGR LAWFGHGALY GDQLGAFAEL | 120 |
| EIAFSDGHVQ RIVTDDSWTA GPSATTANDL YDGQSIDARR YDGSWLLPGF EGDGWVGVHT | 180 |
| LDFDTAKLEP YIGPAVRRVD EREVVEVITT PSGKTVLDFG QNLVGWLRLR VRGEVGAVIT | 240 |
| ARHAEVLEHG ELGVRPLRSA KATDRFTLSG GDDEFAPTLT LHGFRYAEID GWPGDLAQEA | 300 |
| RTAVTAVVVS SDLERIGTFT SSDPLVNQFH ENVVWGMRGN FVDVPTDCPQ RDERLGWTGD | 360 |
| IAAFTPTASF LFDAQSFLRE WLKNVWAEQS HADGIIPFVV PDVLKLGPAV ADFPDPDSTA | 420 |
| VWSDAGVWVP WTLYEAYGDD SVLEDQWESM TAHVRRVRSL LSPSGLWDTG FQFGDWLDPD | 480 |
| APPEDPALAK ADKGVVATAC AYRSADLVAR SARILGRDAE AAEFQGLADD LRRAFLDAYV | 540 |
| DADGRVESDC TTVYSLAIVF GLLDEARETL AGERLSELVE QSGYRISTGF AGTPFITDAL | 600 |
| TRTGHLDDAY RLLLERECPS WLYPVTMGAT TVWERWDSML PDGSINPGEM TSFNHYALGA | 660 |
| VADWLHRVVG GLSALTPGYA SVLVAPQPGG GITSASTSLV TPHGRASVDW ELVDGTLTVT | 720 |
| AEIPEGADAV LRLPGRSDER VGSGRHVASA EVGVAAEVGS H | 761 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.85 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM67(15-180)+GH78(208-733)
| MTWHAQMISP DQDFDGAPLL RREFTLDDGH GDVATATLVV SAYGVLEAHL GGKPVSDDLL | 60 |
| APGWSSYEWR QRFARYDVTA LVGGTSVLGI ALGNGWYRGR LAWFGHGALY GDQLGAFAEL | 120 |
| EIAFSDGHVQ RIVTDDSWTA GPSATTANDL YDGQSIDARR YDGSWLLPGF EGDGWVGVHT | 180 |
| LDFDTAKLEP YIGPAVRRVD EREVVEVITT PSGKTVLDFG QNLVGWLRLR VRGEVGAVIT | 240 |
| ARHAEVLEHG ELGVRPLRSA KATDRFTLSG GDDEFAPTLT LHGFRYAEID GWPGDLAQEA | 300 |
| RTAVTAVVVS SDLERIGTFT SSDPLVNQFH ENVVWGMRGN FVDVPTDCPQ RDERLGWTGD | 360 |
| IAAFTPTASF LFDAQSFLRE WLKNVWAEQS HADGIIPFVV PDVLKLGPAV ADFPDPDSTA | 420 |
| VWSDAGVWVP WTLYEAYGDD SVLEDQWESM TAHVRRVRSL LSPSGLWDTG FQFGDWLDPD | 480 |
| APPEDPALAK ADKGVVATAC AYRSADLVAR SARILGRDAE AAEFQGLADD LRRAFLDAYV | 540 |
| DADGRVESDC TTVYSLAIVF GLLDEARETL AGERLSELVE QSGYRISTGF AGTPFITDAL | 600 |
| TRTGHLDDAY RLLLERECPS WLYPVTMGAT TVWERWDSML PDGSINPGEM TSFNHYALGA | 660 |
| VADWLHRVVG GLSALTPGYA SVLVAPQPGG GITSASTSLV TPHGRASVDW ELVDGTLTVT | 720 |
| AEIPEGADAV LRLPGRSDER VGSGRHVASA EVGVAAEVGS H | 761 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.