Information for CAZyme ID: AQZ94459.1
Basic Information
GenBank ID | AQZ94459.1 |
Family | GT51 |
Sequence Length | 800 |
UniProt ID | A0A1V0B3E2(100,100)![]() |
Average pLDDT? | 88.92 |
CAZy50 ID | 22507 |
CAZy50 Rep | No, SIS00427.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1931241 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Pseudomonadales |
Family | Pseudomonadaceae |
Genus | Halopseudomonas |
Species | Halopseudomonas phragmitis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MRFLKFLFWS LIALLSAPIL GLSGVALYLS PALPDVETLR ELELQTPLRI YSTDHKLIAE | 60 |
FGEMRRFPVN FDQVPSDFIN ALLAAEDDNF LNHHGVDPKG LLRAATELAQ SGQIQTGGST | 120 |
ITMQVAKNYF LTSERVFSRK LNEILLALQI ERNLSKQEIF ELYINKIYLG NRAYGVEAAA | 180 |
QVYYGKSINE LPLADLAMIA GLPKAPSRFN PLINPERAKI RRDWILQRML NLGHIDQVAY | 240 |
QEAVTSPIRA RNHGANPEME APYVAEMARL EMIERYGERA YTDGFHVYTS VSSELQSYAN | 300 |
RALREGLIEY DQRHGYRGPE DRHPDADPAN WQTILAPYRA LGGLLPALVT QVDEEQVEIR | 360 |
LRNGNTGTIA WEAMRWARPY LNANSMGPTP RRPADVLKPG DVIRVIANED GGYRLSQVPS | 420 |
AQAALVVVSP QDGSIQALVG GFSFLQSNYN RATQARRQPG SSFKPFLYSA ALDHGYTPAT | 480 |
IVNDAPLVFV DDYMNSVWRP QNSGGDFLGP IRLREALYRS RNLVSIRLMQ EIGVDESLTY | 540 |
IERFGFPRSD LPRNLSASLG TPELTPLQIA QGYAVIANGG YKVDPWLIER IEDRHGQIID | 600 |
FAKPVVTPEA LAAHLERIQR YTSAPLALVE EPNTVLLAEQ TVDPRTTYLL TSMLKDVITR | 660 |
GTAARARALQ RPDLAGKTGT TNEQKDAWFA GYNGDYASAV WVGFDQPSTL GRREFGGTAA | 720 |
LPIWMRFMAA ALDGKPEHSQ PVPQGVLSVR IDPLTGRAAR PGSNGAFLEV FKEEDAPPPW | 780 |
DELDSGAYPV SDSMAPLELF | 800 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.92 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT51(55-229)
MRFLKFLFWS LIALLSAPIL GLSGVALYLS PALPDVETLR ELELQTPLRI YSTDHKLIAE | 60 |
FGEMRRFPVN FDQVPSDFIN ALLAAEDDNF LNHHGVDPKG LLRAATELAQ SGQIQTGGST | 120 |
ITMQVAKNYF LTSERVFSRK LNEILLALQI ERNLSKQEIF ELYINKIYLG NRAYGVEAAA | 180 |
QVYYGKSINE LPLADLAMIA GLPKAPSRFN PLINPERAKI RRDWILQRML NLGHIDQVAY | 240 |
QEAVTSPIRA RNHGANPEME APYVAEMARL EMIERYGERA YTDGFHVYTS VSSELQSYAN | 300 |
RALREGLIEY DQRHGYRGPE DRHPDADPAN WQTILAPYRA LGGLLPALVT QVDEEQVEIR | 360 |
LRNGNTGTIA WEAMRWARPY LNANSMGPTP RRPADVLKPG DVIRVIANED GGYRLSQVPS | 420 |
AQAALVVVSP QDGSIQALVG GFSFLQSNYN RATQARRQPG SSFKPFLYSA ALDHGYTPAT | 480 |
IVNDAPLVFV DDYMNSVWRP QNSGGDFLGP IRLREALYRS RNLVSIRLMQ EIGVDESLTY | 540 |
IERFGFPRSD LPRNLSASLG TPELTPLQIA QGYAVIANGG YKVDPWLIER IEDRHGQIID | 600 |
FAKPVVTPEA LAAHLERIQR YTSAPLALVE EPNTVLLAEQ TVDPRTTYLL TSMLKDVITR | 660 |
GTAARARALQ RPDLAGKTGT TNEQKDAWFA GYNGDYASAV WVGFDQPSTL GRREFGGTAA | 720 |
LPIWMRFMAA ALDGKPEHSQ PVPQGVLSVR IDPLTGRAAR PGSNGAFLEV FKEEDAPPPW | 780 |
DELDSGAYPV SDSMAPLELF | 800 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.