CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AQZ94459.1

Basic Information

GenBank IDAQZ94459.1
FamilyGT51
Sequence Length800
UniProt IDA0A1V0B3E2(100,100)Download
Average pLDDT?88.92
CAZy50 ID22507
CAZy50 RepNo, SIS00427.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1931241
KingdomBacteria
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusHalopseudomonas
SpeciesHalopseudomonas phragmitis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRFLKFLFWS  LIALLSAPIL  GLSGVALYLS  PALPDVETLR  ELELQTPLRI  YSTDHKLIAE60
FGEMRRFPVN  FDQVPSDFIN  ALLAAEDDNF  LNHHGVDPKG  LLRAATELAQ  SGQIQTGGST120
ITMQVAKNYF  LTSERVFSRK  LNEILLALQI  ERNLSKQEIF  ELYINKIYLG  NRAYGVEAAA180
QVYYGKSINE  LPLADLAMIA  GLPKAPSRFN  PLINPERAKI  RRDWILQRML  NLGHIDQVAY240
QEAVTSPIRA  RNHGANPEME  APYVAEMARL  EMIERYGERA  YTDGFHVYTS  VSSELQSYAN300
RALREGLIEY  DQRHGYRGPE  DRHPDADPAN  WQTILAPYRA  LGGLLPALVT  QVDEEQVEIR360
LRNGNTGTIA  WEAMRWARPY  LNANSMGPTP  RRPADVLKPG  DVIRVIANED  GGYRLSQVPS420
AQAALVVVSP  QDGSIQALVG  GFSFLQSNYN  RATQARRQPG  SSFKPFLYSA  ALDHGYTPAT480
IVNDAPLVFV  DDYMNSVWRP  QNSGGDFLGP  IRLREALYRS  RNLVSIRLMQ  EIGVDESLTY540
IERFGFPRSD  LPRNLSASLG  TPELTPLQIA  QGYAVIANGG  YKVDPWLIER  IEDRHGQIID600
FAKPVVTPEA  LAAHLERIQR  YTSAPLALVE  EPNTVLLAEQ  TVDPRTTYLL  TSMLKDVITR660
GTAARARALQ  RPDLAGKTGT  TNEQKDAWFA  GYNGDYASAV  WVGFDQPSTL  GRREFGGTAA720
LPIWMRFMAA  ALDGKPEHSQ  PVPQGVLSVR  IDPLTGRAAR  PGSNGAFLEV  FKEEDAPPPW780
DELDSGAYPV  SDSMAPLELF  800

Predicted 3D structure by AlphaFold2 with pLDDT = 88.92 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(55-229)

MRFLKFLFWS  LIALLSAPIL  GLSGVALYLS  PALPDVETLR  ELELQTPLRI  YSTDHKLIAE60
FGEMRRFPVN  FDQVPSDFIN  ALLAAEDDNF  LNHHGVDPKG  LLRAATELAQ  SGQIQTGGST120
ITMQVAKNYF  LTSERVFSRK  LNEILLALQI  ERNLSKQEIF  ELYINKIYLG  NRAYGVEAAA180
QVYYGKSINE  LPLADLAMIA  GLPKAPSRFN  PLINPERAKI  RRDWILQRML  NLGHIDQVAY240
QEAVTSPIRA  RNHGANPEME  APYVAEMARL  EMIERYGERA  YTDGFHVYTS  VSSELQSYAN300
RALREGLIEY  DQRHGYRGPE  DRHPDADPAN  WQTILAPYRA  LGGLLPALVT  QVDEEQVEIR360
LRNGNTGTIA  WEAMRWARPY  LNANSMGPTP  RRPADVLKPG  DVIRVIANED  GGYRLSQVPS420
AQAALVVVSP  QDGSIQALVG  GFSFLQSNYN  RATQARRQPG  SSFKPFLYSA  ALDHGYTPAT480
IVNDAPLVFV  DDYMNSVWRP  QNSGGDFLGP  IRLREALYRS  RNLVSIRLMQ  EIGVDESLTY540
IERFGFPRSD  LPRNLSASLG  TPELTPLQIA  QGYAVIANGG  YKVDPWLIER  IEDRHGQIID600
FAKPVVTPEA  LAAHLERIQR  YTSAPLALVE  EPNTVLLAEQ  TVDPRTTYLL  TSMLKDVITR660
GTAARARALQ  RPDLAGKTGT  TNEQKDAWFA  GYNGDYASAV  WVGFDQPSTL  GRREFGGTAA720
LPIWMRFMAA  ALDGKPEHSQ  PVPQGVLSVR  IDPLTGRAAR  PGSNGAFLEV  FKEEDAPPPW780
DELDSGAYPV  SDSMAPLELF  800

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help