CAZyme3D

You are here: Home Cite us: 2025

Entry ID

Information for CAZyme ID: AQZ69699.1

Basic Information

GenBank IDAQZ69699.1
FamilyGH13_30
Sequence Length509
UniProt IDA0A1V0AHQ0(100,100)Download
Average pLDDT?95.63
CAZy50 ID47128
CAZy50 RepNo, AGZ43808.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1909395
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyStreptosporangiaceae
GenusNonomuraea
Species[Actinomadura] parvosata

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MDIPWWRDAV  VYEIYVRSFA  DASGDGVGDL  AGVRERLPYL  RRLGVDAIWL  TPFYRSPMAD60
GGYDVADYRD  VDPLFGSLRD  FEALVADAHE  HELRVIVDIV  PNHSSSEHPW  FQAALRGEGR120
ERYIFRDTVN  NWQSTFGGSA  WTRVPDGQYY  LHLFAPGQPD  FNWRNPEVHA  EFLDILRFWL180
DRGVDGFRID  VAMGLYKAEG  LPDVGDQSFS  SVSPVWGQPE  VHDVYREWRR  VLDGYPGQRM240
AVGEVWTDSP  EDLALYVRPD  ELHQSFNFAW  LQAPWSPTAF  RKVIDDTLAT  VPFATWVLSN300
HDVVRHRTRY  GTADPGTGLA  RARAALLAML  ALPGSAYLYQ  GEELGLPEVT  DLPDDARQDP360
VFFQSKGKLP  GRDGCRVPIP  WTVDPPSHGF  SPGGVEPWLP  QPESFAELSV  EKQEGDADST420
LEFYRRALAC  RRELVRSLPY  TLEWLKSPEG  ALFFTRGPLI  CAINCGTRPV  RLPRHEEVLL480
SSAPLKRGLL  PPDAAVWLRR  SADAPTSAG509

Predicted 3D structure by AlphaFold2 with pLDDT = 95.63 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH13_30(28-348)

MDIPWWRDAV  VYEIYVRSFA  DASGDGVGDL  AGVRERLPYL  RRLGVDAIWL  TPFYRSPMAD60
GGYDVADYRD  VDPLFGSLRD  FEALVADAHE  HELRVIVDIV  PNHSSSEHPW  FQAALRGEGR120
ERYIFRDTVN  NWQSTFGGSA  WTRVPDGQYY  LHLFAPGQPD  FNWRNPEVHA  EFLDILRFWL180
DRGVDGFRID  VAMGLYKAEG  LPDVGDQSFS  SVSPVWGQPE  VHDVYREWRR  VLDGYPGQRM240
AVGEVWTDSP  EDLALYVRPD  ELHQSFNFAW  LQAPWSPTAF  RKVIDDTLAT  VPFATWVLSN300
HDVVRHRTRY  GTADPGTGLA  RARAALLAML  ALPGSAYLYQ  GEELGLPEVT  DLPDDARQDP360
VFFQSKGKLP  GRDGCRVPIP  WTVDPPSHGF  SPGGVEPWLP  QPESFAELSV  EKQEGDADST420
LEFYRRALAC  RRELVRSLPY  TLEWLKSPEG  ALFFTRGPLI  CAINCGTRPV  RLPRHEEVLL480
SSAPLKRGLL  PPDAAVWLRR  SADAPTSAG509

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help