Information for CAZyme ID: AQX73615.1
Basic Information
| GenBank ID | AQX73615.1 |
| Family | GT55 |
| Sequence Length | 694 |
| UniProt ID | A0A1S7H222(100,100) |
| Average pLDDT? | 88.16 |
| CAZy50 ID | 38661 |
| CAZy50 Rep | No, ADJ26179.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 61435 |
| Kingdom | Bacteria |
| Phylum | Chloroflexota |
| Class | Dehalococcoidia |
| Order | Dehalococcoidales |
| Family | Dehalococcoidaceae |
| Genus | Dehalococcoides |
| Species | Dehalococcoides mccartyi |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MRIESLRPAE HLGNVTIHGV RRFLELDSGA SNLPHLQESR EVEIVDQQAI SDVEKKMAIV | 60 |
| LPIKDEDLKV FEGVLSGIPH DCLMIVISNS SKQEVDNFKN EKDIVNRFCR ITHRQAFVVH | 120 |
| QKNPELANAI ADAGYPELLG EDGLIRSGKA EGMILGIILT MFSGRDYVGF IDTDNYIPGA | 180 |
| VWEYAKHFAT GFNLAQSPYS MVRILWKYKP KLVGDLYFKR WGRVSEVTNK HLNHLISSKG | 240 |
| KFETEIIKTG NAGEHAMSIE LAKRLTYGTG YAVETKEIMS ILEQFSGILP IEDREVAEEG | 300 |
| VEILQTETIN PHLHEDKGGD HLLQDMLLPS LAVIYHSPLA DDAGRKMIET QLAGMEGFDA | 360 |
| GIQIPQIKLI PPPQKMDLPK FSAIIEKYLP QIILPDGELF SRAGRPSRLP SLGQFKKIVY | 420 |
| TDLDGTLLNP LTYSYSTALD ALRLLKDKQL PLVFCSAKTM GEQDLYRNEL GIKDPFITEN | 480 |
| GGAIFIPKDY FRLPFAYDRI AGNYLVIELG MAYKDIRHIL KKALAAACAE IENSEKAGNI | 540 |
| FITSFGDMSV EDVSRLTDLN LKQAELAKQR EYSETVHIEG DKRSTNMVLN HIQQSGLEYS | 600 |
| FGGRFYEVTG GNDKGKAIKI LNELFRLNFG NIHTFGLGDS ENDYSMLETV DSPVLVQRPG | 660 |
| NKWHKMRLRN PSYVKGVGPE GFSRAVTDII IPME | 694 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.16 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT55(6-385)
| MRIESLRPAE HLGNVTIHGV RRFLELDSGA SNLPHLQESR EVEIVDQQAI SDVEKKMAIV | 60 |
| LPIKDEDLKV FEGVLSGIPH DCLMIVISNS SKQEVDNFKN EKDIVNRFCR ITHRQAFVVH | 120 |
| QKNPELANAI ADAGYPELLG EDGLIRSGKA EGMILGIILT MFSGRDYVGF IDTDNYIPGA | 180 |
| VWEYAKHFAT GFNLAQSPYS MVRILWKYKP KLVGDLYFKR WGRVSEVTNK HLNHLISSKG | 240 |
| KFETEIIKTG NAGEHAMSIE LAKRLTYGTG YAVETKEIMS ILEQFSGILP IEDREVAEEG | 300 |
| VEILQTETIN PHLHEDKGGD HLLQDMLLPS LAVIYHSPLA DDAGRKMIET QLAGMEGFDA | 360 |
| GIQIPQIKLI PPPQKMDLPK FSAIIEKYLP QIILPDGELF SRAGRPSRLP SLGQFKKIVY | 420 |
| TDLDGTLLNP LTYSYSTALD ALRLLKDKQL PLVFCSAKTM GEQDLYRNEL GIKDPFITEN | 480 |
| GGAIFIPKDY FRLPFAYDRI AGNYLVIELG MAYKDIRHIL KKALAAACAE IENSEKAGNI | 540 |
| FITSFGDMSV EDVSRLTDLN LKQAELAKQR EYSETVHIEG DKRSTNMVLN HIQQSGLEYS | 600 |
| FGGRFYEVTG GNDKGKAIKI LNELFRLNFG NIHTFGLGDS ENDYSMLETV DSPVLVQRPG | 660 |
| NKWHKMRLRN PSYVKGVGPE GFSRAVTDII IPME | 694 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.