Information for CAZyme ID: APO42717.1
Basic Information
| GenBank ID | APO42717.1 |
| Family | GH94 |
| Sequence Length | 1130 |
| UniProt ID | A0A1L5LH43(100,100) |
| Average pLDDT? | 94.56 |
| CAZy50 ID | 9064 |
| CAZy50 Rep | No, ADM68187.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 528191 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Bacillales |
| Family | Paenibacillaceae |
| Genus | Paenibacillus |
| Species | Paenibacillus xylanexedens |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MTTIINEPIR LSAGELSFTF LNSGDLYQAT SGTTMLNQLL SNQIDGSLNN LYLRVHEGEN | 60 |
| ISSFPLLGVR SNSKVITSKA QSSNQLIWEG TVQLEGSEKG IGYQVVFTAT PQGVWFWDVK | 120 |
| LTGQQHNVDV VYGQDVGLAD PGAVRSNEAY LSQYIDHTVF EDEAKGYVVC SRQNQPQGGA | 180 |
| FPYMQQGSLT KAVGYSTDGF QFFGLSYKET NQPESLNRQT LANETYQYEF AYTALQSELL | 240 |
| NLNGEAQVVF YGLAKPNHAE GISALEFGDE VTAAWNEVQA LTVENGDTLE QVKLSSFLGE | 300 |
| PLVTLDLTQD EIHDLFPDRH QEEHSGEELL SFFTGSYEHI VLKAKELLVE RPHGHILMSG | 360 |
| GNVQLGAQVI TTTSYMYGIF NSQLVIGNTN FNKMISNARN ALNVPKTAGQ RIYVEMDGQY | 420 |
| RLLTMPSLFE IGFNYVRWIY KTESDTIIVT NYTGAHTTEV SMNVRSTSGT AYRYLVTNQI | 480 |
| TMNVNEYEYS LHMTQDGDTL IFKADPQAIS AGTYPDLQYR MSVDGAAVNV GDETLLASGI | 540 |
| RSGSASLVTL SLEASAEWTL KVQGVLEGQA DSGVVAGSSL TFEEEVQAYR EFFAGVMNGF | 600 |
| RLSRGEGQSA EDLFKVNALA WWYTHNMLVH YSVPHGLEQY GGAAWGTRDV CQGPVEYFMA | 660 |
| TQKYEQVRDI IKMVYTHQYE DDGNWPQWFM FDKYFAIQQE ESHGDIIVWP LKVLADYLTA | 720 |
| TRDYAILDEK VPYTVKHSFG FTGETATVLD HAKKEIEYIR SHFLHDTFLS SYGDGDWDDT | 780 |
| LQPANAQLKQ YMVSSWTVAL TYQSVNVLSQ ALKFKDADFA QELDVLAQGI REDFNRYMLG | 840 |
| TDVIPGFVYM EEADQAKLML HPTDTETGIQ YRLLPMTRSM IGELLNAEQA ESHYALIREQ | 900 |
| FLCPDGVRLM NRPAQYAGGV STHFKRAEQA SNFGREIGLQ YVHAHIRYVE AMAKLGKTDQ | 960 |
| VWNGLAMINP VGIGEVVPNA EIRQANSYFS SSDGKFNTRY EAQEHFDQLR KGTVQVKGGW | 1020 |
| RIYSSGPGIY MNQLISNALG IRQEGGDLVI DPVLPAELNG MQFEFEYAGE PVTFIYHLNE | 1080 |
| GAVSRIAVNG KDIRTERTAN RYRQGGVSIS LDEFRQARSA TERTVVDIYM | 1130 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.56 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH94(110-1098)
| MTTIINEPIR LSAGELSFTF LNSGDLYQAT SGTTMLNQLL SNQIDGSLNN LYLRVHEGEN | 60 |
| ISSFPLLGVR SNSKVITSKA QSSNQLIWEG TVQLEGSEKG IGYQVVFTAT PQGVWFWDVK | 120 |
| LTGQQHNVDV VYGQDVGLAD PGAVRSNEAY LSQYIDHTVF EDEAKGYVVC SRQNQPQGGA | 180 |
| FPYMQQGSLT KAVGYSTDGF QFFGLSYKET NQPESLNRQT LANETYQYEF AYTALQSELL | 240 |
| NLNGEAQVVF YGLAKPNHAE GISALEFGDE VTAAWNEVQA LTVENGDTLE QVKLSSFLGE | 300 |
| PLVTLDLTQD EIHDLFPDRH QEEHSGEELL SFFTGSYEHI VLKAKELLVE RPHGHILMSG | 360 |
| GNVQLGAQVI TTTSYMYGIF NSQLVIGNTN FNKMISNARN ALNVPKTAGQ RIYVEMDGQY | 420 |
| RLLTMPSLFE IGFNYVRWIY KTESDTIIVT NYTGAHTTEV SMNVRSTSGT AYRYLVTNQI | 480 |
| TMNVNEYEYS LHMTQDGDTL IFKADPQAIS AGTYPDLQYR MSVDGAAVNV GDETLLASGI | 540 |
| RSGSASLVTL SLEASAEWTL KVQGVLEGQA DSGVVAGSSL TFEEEVQAYR EFFAGVMNGF | 600 |
| RLSRGEGQSA EDLFKVNALA WWYTHNMLVH YSVPHGLEQY GGAAWGTRDV CQGPVEYFMA | 660 |
| TQKYEQVRDI IKMVYTHQYE DDGNWPQWFM FDKYFAIQQE ESHGDIIVWP LKVLADYLTA | 720 |
| TRDYAILDEK VPYTVKHSFG FTGETATVLD HAKKEIEYIR SHFLHDTFLS SYGDGDWDDT | 780 |
| LQPANAQLKQ YMVSSWTVAL TYQSVNVLSQ ALKFKDADFA QELDVLAQGI REDFNRYMLG | 840 |
| TDVIPGFVYM EEADQAKLML HPTDTETGIQ YRLLPMTRSM IGELLNAEQA ESHYALIREQ | 900 |
| FLCPDGVRLM NRPAQYAGGV STHFKRAEQA SNFGREIGLQ YVHAHIRYVE AMAKLGKTDQ | 960 |
| VWNGLAMINP VGIGEVVPNA EIRQANSYFS SSDGKFNTRY EAQEHFDQLR KGTVQVKGGW | 1020 |
| RIYSSGPGIY MNQLISNALG IRQEGGDLVI DPVLPAELNG MQFEFEYAGE PVTFIYHLNE | 1080 |
| GAVSRIAVNG KDIRTERTAN RYRQGGVSIS LDEFRQARSA TERTVVDIYM | 1130 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.