Information for CAZyme ID: APE45576.1
Basic Information
GenBank ID | APE45576.1 |
Family | GH102 |
Sequence Length | 344 |
UniProt ID | A0A1J0WN49(100,100)![]() |
Average pLDDT? | 89.11 |
CAZy50 ID | 85751 |
CAZy50 Rep | No, QPM91483.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1917485 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Alphaproteobacteria |
Order | Rhodobacterales |
Family | Roseobacteraceae |
Genus | Sulfitobacter |
Species | Sulfitobacter alexandrii |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MHAVLVSAWA GVAAVTAAFA NDVTYTVMDF DQLDGWENDD HASALETFLN TCRDMDEVDW | 60 |
TAVCRFAQTD PDPRQFFELF FRPVLIEDGQ DALFTGYFEP ELDGDLYRSD RFRYPVYQMP | 120 |
DEALAQNPWL TRREILDGEV LAGRGLEIAW VDDPVELFFL QIQGSGRIRL PDGRYVRVGY | 180 |
RGANGHPYKS IGVELVRRGV YQPHQVSAQV IKNWVRRNPE DGRELLYHNP SYVFFREISE | 240 |
VPADKGPLGA MNRSVTAMRS IAVDPSFVKL GAPVWIEKDG EKPLRRLMIA QDTGSAIKGA | 300 |
QRADVFFGTG DRAGLEAGKL RDPGRMMVLM PIQRAYALLP ESAI | 344 |
Predicted 3D structure by AlphaFold2 with pLDDT = 89.11 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH102(103-236)
MHAVLVSAWA GVAAVTAAFA NDVTYTVMDF DQLDGWENDD HASALETFLN TCRDMDEVDW | 60 |
TAVCRFAQTD PDPRQFFELF FRPVLIEDGQ DALFTGYFEP ELDGDLYRSD RFRYPVYQMP | 120 |
DEALAQNPWL TRREILDGEV LAGRGLEIAW VDDPVELFFL QIQGSGRIRL PDGRYVRVGY | 180 |
RGANGHPYKS IGVELVRRGV YQPHQVSAQV IKNWVRRNPE DGRELLYHNP SYVFFREISE | 240 |
VPADKGPLGA MNRSVTAMRS IAVDPSFVKL GAPVWIEKDG EKPLRRLMIA QDTGSAIKGA | 300 |
QRADVFFGTG DRAGLEAGKL RDPGRMMVLM PIQRAYALLP ESAI | 344 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.