Information for CAZyme ID: APA08821.1
Basic Information
GenBank ID | APA08821.1 |
Family | CBM35, GH43_24 |
Sequence Length | 450 |
UniProt ID | A0A1D9Q1J4(100,100)![]() |
Average pLDDT? | 95.35 |
CAZy50 ID | 61788 |
CAZy50 Rep | No, WDK20756.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 665079 |
Kingdom | Eukaryota |
Phylum | Ascomycota |
Class | Leotiomycetes |
Order | Helotiales |
Family | Sclerotiniaceae |
Genus | Sclerotinia |
Species | Sclerotinia sclerotiorum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MLHTVFLLLS IWSSYVLASL QIISGATWTA SGLNQHIQAH GGGIIQVGST YYWAGENKLN | 60 |
GSAFQSINCY SSTDLVNWKF NSYLLTLQSS GDLGPNRVVE RPHIMYNDAT GKYVMWMHID | 120 |
SSNYGEARAG VATSSSVCGS YTYLGASQPL GYQSRDLNVF KDTDGTGYLL TEDRANGLRI | 180 |
DKLSADYTSV VSAVYLFADY EAPAIYKSGD TYFMFASHLS GWSPNDNVYA TATNLSGPWS | 240 |
AFSNFATVGS NTYSSQTAAV VNINGVVMYM GDRWESSNLM TSTYVWLPLT ISGTKASMSN | 300 |
EVNWIIDPAA GTWTTGPSEA WLEADAATNI LANGAKNITC SGCSDGVRVG YIGGPSPGGT | 360 |
LTIDGVSSSV ATTTTIRIHH LNGDSTQRYA NVVVNGVSNI IAFLPTADGN TPGTSVLTTA | 420 |
LKSGAGNVIE FESYNSGWAP DIDRIMVPVS | 450 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.35 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH43_24(44-275)+CBM35(350-447)
0 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.