CAZyme3D

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Entry ID

Information for CAZyme ID: AOR26667.1

Basic Information

GenBank IDAOR26667.1
FamilyGH17
Sequence Length309
UniProt IDA0A1D7XTJ8(100,100)Download
Average pLDDT?96.60
CAZy50 ID138878
CAZy50 RepNo, AAZ25605.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1336795
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFormosa
SpeciesFormosa sp. Hel3_A1_48

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MDYTSFFGVK  KGLAVCYSGY  RNGQRPGHIY  PSYEEVKEDL  TIIEKQWQYI  RLYSCDAHSK60
TVLEVIKNEN  MTLKVMLGAY  IEAEENNPNC  PWGGNYNPDE  LLTNKNRNLK  RMDLLIGFAN120
QYRDIIFSLS  VGNEACVDWT  DHLVSVDAVV  SYVKYVKAQA  TQPVTFCENY  VPWLDKLEPL180
ANEVDFISIH  TYPVWEHKTI  YEGMEFTKQN  YDAVAKKYPN  KLIVITEAGW  ATQSNGYGIP240
VENVNNEVQK  IYYKALSHWS  KSETILTFVF  EAFDEPWKGS  SDPNEPEKHW  GLYTVDRAPK300
LAMQPIGYK309

Predicted 3D structure by AlphaFold2 with pLDDT = 96.60 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) :

MDYTSFFGVK  KGLAVCYSGY  RNGQRPGHIY  PSYEEVKEDL  TIIEKQWQYI  RLYSCDAHSK60
TVLEVIKNEN  MTLKVMLGAY  IEAEENNPNC  PWGGNYNPDE  LLTNKNRNLK  RMDLLIGFAN120
QYRDIIFSLS  VGNEACVDWT  DHLVSVDAVV  SYVKYVKAQA  TQPVTFCENY  VPWLDKLEPL180
ANEVDFISIH  TYPVWEHKTI  YEGMEFTKQN  YDAVAKKYPN  KLIVITEAGW  ATQSNGYGIP240
VENVNNEVQK  IYYKALSHWS  KSETILTFVF  EAFDEPWKGS  SDPNEPEKHW  GLYTVDRAPK300
LAMQPIGYK309

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help