Information for CAZyme ID: AOF52363.1
Basic Information
| GenBank ID | AOF52363.1 |
| Family | GH2 |
| Sequence Length | 1014 |
| UniProt ID | A0A1B3JE56(100,100) |
| Average pLDDT? | 95.23 |
| CAZy50 ID | 13070 |
| CAZy50 Rep | No, QIW15598.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1679001 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | |
| Species | Pasteurellaceae bacterium NI1060 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MPLPNYFQDP QILHINTTPH HAYFIPFDSV ESAVKNQREF SAFFTLLNGE WDFAYFDRYV | 60 |
| DLPKDFLHFS FSEKIPVPAN WQNHGYDHHH YTNVNYPFPF DPPYVPIENP CGLYHRTFTH | 120 |
| SPKQNKRYLL NFEGVDSCLF VYVNHQFVGY SQISHCTSEF DVSDFLKNGE NHLHVVVLKW | 180 |
| CDGSYLEDQD KFRMSGIFRD VYLLERENHY LQDFFIRTEL ADDLKSAVIS VEVSFVERGK | 240 |
| PAHLREIAWQ LNDPQGEILL SAVTESGFHF TLNEITLWNA ENPQLYTLLF RYGSEVICQK | 300 |
| IGLRKIEVKD GVMLFNGEAI KFKGVNRHDS DPKTGYVINH EQALQDLRLM KEHNFNAIRT | 360 |
| AHYPNAPWFA ELCDEYGFYL IAESDIESHG TNAVYVKSPE TSILLGVKTE IDHQAIRQQI | 420 |
| IDNYCYMARS PEFNAAILDR TYANVERDKN RCSVLVWSLG NESGYGENFE QAAAWVKRRD | 480 |
| PNRLVHYENA VFQHSDHQND LTNLDFHSEM YTGTEELDAY FADPHNRKPY LFCEYLHAMG | 540 |
| NSCGDAEEYF QAMERHRGAA GGFVWEWCNH SPYLPHSERM GYGGDFGDVP NDGNFCADGL | 600 |
| VTADRQIQSS LLELKNVQRP IRAFLDEGNV RLKNYMDFTD TEEVIAIHYQ ITENLRVISE | 660 |
| GYFDGIKITP KATALLPLDL PETDNELWHI TLTYYQKIDR GLVAKNHCLG FDQLCFSSQS | 720 |
| RLPVHQIKKA TQTISLNETP HHVLISVGKI CYELDKHRGI ITQIFCEGSA WLNAPLDFNI | 780 |
| WRAPLDNDSL IKTHWLAAGY EQAVTRAYDF VIVEQESALE IRVKSGINAV SRERILTLDV | 840 |
| IYRIDTQGNL SIKIHAKKQP HLPFLPRFGV RFFLKDSFQQ AEYIGYGETE SYLDKHQATQ | 900 |
| FNLYKTTPKS NHVLYLKPQE NGSHFGCRRF TIKNDREGFS IYCDKAFSFN LSPYTQEELE | 960 |
| AKKHNDELEE SGSTILCVDY KMSGIGSNSC GPSLKEKYRL SETEWDWEMQ FLPR | 1014 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.23 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(29-901)
| MPLPNYFQDP QILHINTTPH HAYFIPFDSV ESAVKNQREF SAFFTLLNGE WDFAYFDRYV | 60 |
| DLPKDFLHFS FSEKIPVPAN WQNHGYDHHH YTNVNYPFPF DPPYVPIENP CGLYHRTFTH | 120 |
| SPKQNKRYLL NFEGVDSCLF VYVNHQFVGY SQISHCTSEF DVSDFLKNGE NHLHVVVLKW | 180 |
| CDGSYLEDQD KFRMSGIFRD VYLLERENHY LQDFFIRTEL ADDLKSAVIS VEVSFVERGK | 240 |
| PAHLREIAWQ LNDPQGEILL SAVTESGFHF TLNEITLWNA ENPQLYTLLF RYGSEVICQK | 300 |
| IGLRKIEVKD GVMLFNGEAI KFKGVNRHDS DPKTGYVINH EQALQDLRLM KEHNFNAIRT | 360 |
| AHYPNAPWFA ELCDEYGFYL IAESDIESHG TNAVYVKSPE TSILLGVKTE IDHQAIRQQI | 420 |
| IDNYCYMARS PEFNAAILDR TYANVERDKN RCSVLVWSLG NESGYGENFE QAAAWVKRRD | 480 |
| PNRLVHYENA VFQHSDHQND LTNLDFHSEM YTGTEELDAY FADPHNRKPY LFCEYLHAMG | 540 |
| NSCGDAEEYF QAMERHRGAA GGFVWEWCNH SPYLPHSERM GYGGDFGDVP NDGNFCADGL | 600 |
| VTADRQIQSS LLELKNVQRP IRAFLDEGNV RLKNYMDFTD TEEVIAIHYQ ITENLRVISE | 660 |
| GYFDGIKITP KATALLPLDL PETDNELWHI TLTYYQKIDR GLVAKNHCLG FDQLCFSSQS | 720 |
| RLPVHQIKKA TQTISLNETP HHVLISVGKI CYELDKHRGI ITQIFCEGSA WLNAPLDFNI | 780 |
| WRAPLDNDSL IKTHWLAAGY EQAVTRAYDF VIVEQESALE IRVKSGINAV SRERILTLDV | 840 |
| IYRIDTQGNL SIKIHAKKQP HLPFLPRFGV RFFLKDSFQQ AEYIGYGETE SYLDKHQATQ | 900 |
| FNLYKTTPKS NHVLYLKPQE NGSHFGCRRF TIKNDREGFS IYCDKAFSFN LSPYTQEELE | 960 |
| AKKHNDELEE SGSTILCVDY KMSGIGSNSC GPSLKEKYRL SETEWDWEMQ FLPR | 1014 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.