CAZyme3D

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Entry ID

Information for CAZyme ID: ANZ40233.1

Basic Information

GenBank IDANZ40233.1
FamilyCBM2, GH5_8
Sequence Length534
UniProt IDA0A1B2HR97(100,100)Download
Average pLDDT?90.84
CAZy50 ID31500
CAZy50 RepNo, ANN17163.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1586287
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusLentzea
SpeciesLentzea guizhouensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKRLLTLLSV  LLVGLSVLTA  PSVAQPAAGF  HVSGGRLYDA  TGAEFVMRGV  NHAHTWYTSR60
TTQALTDLKA  LRSNTVRVVL  SSGDRWTRND  AADVANVISQ  CKRNRLICVL  EVHDTTGYGE120
QSGAVSLARA  VDYWISVQSA  MTGQEAYVIL  NIGNEPWGNT  GASAWTADTK  SAISRLRAAG180
FSHTIMVDAP  NWGQDWSFTM  RDNAASVFAA  DPQRNTVFSV  HMYGVFDTAA  EITDYLGRFV240
AAGLPIVVGE  FGHNHSDGDP  DENTIFSYTQ  AQRLGYLGWS  WSGNGGGVEY  LDMATEFDAS300
RLTSWGQRIF  DGANGIVATS  REAAVFGGGS  DTTAPTTPGT  PVVSGVTGTG  ASLAWTASTD360
AVGVTSYQVV  RISGGAESAL  TSVASASAAL  TNLSPSTSYT  VAVYALDAAG  NRSGRSPSVT420
FTTGSAPAGA  CAVTYRVTGQ  WQGGFQGDVK  VQNTGTAAVN  GWALRWTFAN  GQTVTQMWNA480
TPSQSGAAVT  ASNVAYNAAI  PAGGSVSFGF  TGAWNSTNAV  PGAFTLNGAA  CSSV534

Predicted 3D structure by AlphaFold2 with pLDDT = 90.84 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH5_8(39-288)+CBM2(431-531)

MKRLLTLLSV  LLVGLSVLTA  PSVAQPAAGF  HVSGGRLYDA  TGAEFVMRGV  NHAHTWYTSR60
TTQALTDLKA  LRSNTVRVVL  SSGDRWTRND  AADVANVISQ  CKRNRLICVL  EVHDTTGYGE120
QSGAVSLARA  VDYWISVQSA  MTGQEAYVIL  NIGNEPWGNT  GASAWTADTK  SAISRLRAAG180
FSHTIMVDAP  NWGQDWSFTM  RDNAASVFAA  DPQRNTVFSV  HMYGVFDTAA  EITDYLGRFV240
AAGLPIVVGE  FGHNHSDGDP  DENTIFSYTQ  AQRLGYLGWS  WSGNGGGVEY  LDMATEFDAS300
RLTSWGQRIF  DGANGIVATS  REAAVFGGGS  DTTAPTTPGT  PVVSGVTGTG  ASLAWTASTD360
AVGVTSYQVV  RISGGAESAL  TSVASASAAL  TNLSPSTSYT  VAVYALDAAG  NRSGRSPSVT420
FTTGSAPAGA  CAVTYRVTGQ  WQGGFQGDVK  VQNTGTAAVN  GWALRWTFAN  GQTVTQMWNA480
TPSQSGAAVT  ASNVAYNAAI  PAGGSVSFGF  TGAWNSTNAV  PGAFTLNGAA  CSSV534

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help