CAZyme3D

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Entry ID

Information for CAZyme ID: ANY72712.1

Basic Information

GenBank IDANY72712.1
FamilyGT2
Sequence Length361
UniProt IDA0A1B2DYG6(100,100)Download
Average pLDDT?93.26
CAZy50 ID34221
CAZy50 RepNo, QHE54105.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1870820
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus ihbetae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVTISLCLIV  KNEEQVLERC  LHSVKEVVDE  IIIVDTGSTD  HTLEIAARYT  DRIYHFDWID60
DFSAARNYSF  SHATKEYILW  LDADDWLQPA  DLEKFKALKQ  NLDPTVDSIC  MDYYISFDPL120
GKPTTVVKRN  RLVKRSKHFQ  WRDPVHEVLE  VTGNIVLSDI  AVSHDRVHAD  SGRNLRIYEN180
LFAKGVTLSR  RQLLHYAMEL  SANGYYKKAI  EIYETMICDT  TGYYEEKLDA  CDRMAHCYHE240
LGQKEQELQS  LLRTLHFDVP  RAEYVCRIAY  YFQELNDFEK  AVHWYELALK  LDKPGNRLYS300
VNQAAWTWFP  HLQLTFCYGK  LGQLEKAYEH  NERALAYAPD  DPDILYNKQL  LEEKLGRKKQ360
R361

Predicted 3D structure by AlphaFold2 with pLDDT = 93.26 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(5-109)

MVTISLCLIV  KNEEQVLERC  LHSVKEVVDE  IIIVDTGSTD  HTLEIAARYT  DRIYHFDWID60
DFSAARNYSF  SHATKEYILW  LDADDWLQPA  DLEKFKALKQ  NLDPTVDSIC  MDYYISFDPL120
GKPTTVVKRN  RLVKRSKHFQ  WRDPVHEVLE  VTGNIVLSDI  AVSHDRVHAD  SGRNLRIYEN180
LFAKGVTLSR  RQLLHYAMEL  SANGYYKKAI  EIYETMICDT  TGYYEEKLDA  CDRMAHCYHE240
LGQKEQELQS  LLRTLHFDVP  RAEYVCRIAY  YFQELNDFEK  AVHWYELALK  LDKPGNRLYS300
VNQAAWTWFP  HLQLTFCYGK  LGQLEKAYEH  NERALAYAPD  DPDILYNKQL  LEEKLGRKKQ360
R361

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help