CAZyme3D

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Entry ID

Information for CAZyme ID: ANX00638.1

Basic Information

GenBank IDANX00638.1
FamilyCBM22, CBM9, GH10
Sequence Length1032
UniProt IDA0A1B1YIP8(100,100)Download
Average pLDDT?90.17
CAZy50 ID3306
CAZy50 RepNo, AEI43097.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1346611
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusThermoclostridium
SpeciesThermoclostridium stercorarium

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNGRNGGKRP  IASLLVLTLA  FLFIPVTKAE  TTVYHETFAE  GKGAAVQSGG  ATITHVTGKF60
FDGNGDGAAL  YISNRVNNWD  AADFRFSDIG  LQDGRIYKIT  VKGYVDPDVH  VPEGSQIWLQ120
TVNSYGWWGS  TDIKAGEAFT  LTGVYKVDTT  NDYALRIQSN  DTGAFVPFYI  GEILITEETV180
PQDDSRNGNK  THAEKFTPIT  FEDQTTGGFT  GRAGTEILTV  TDEANHTDGG  RYSLKVGGRN240
DTWHGPALRV  EKYVDQGYEY  KVAVYVRLIS  PESAQLQLST  QIGEGTSASY  VNLAKKNVAI300
SDGWVLLEGT  YRYDNLGGGY  LTIYVESPDS  PEASFYIDDI  NFEPTGMKSE  EIEKGLKSLK360
DVYKDNFLTG  TAISLRDLEG  VRFELLKKHF  NAVTAENAMK  PSELQREKGN  FTFDGADRLV420
NAAISAGMKV  HGHTLVWHQQ  TPAWMNIKLD  SGGNIVYLSR  EEALENMRNH  IRTVIEHFGD480
KVISWDVVNE  AMSDNPSNPS  DWRGSLRKSP  WYYAIGEDYV  EQAFLAAREV  LDEHPEWDIK540
LYYNDYNLDN  QNKALAVYNM  VRELNEKYQK  THPGKLLIDG  IGMQGHYSVN  TNPKNVELSL600
KRFTELGVEV  SISELDIRAG  SNYQLTEKEA  NAQAYLYAQL  FKIFREYSDS  IARVTFWGMD660
DGTSWRAEES  PLLFDRTLKA  KPAYYAVADP  DEFIEKYKPE  TIEANRAYAV  YGTPEIDGKT720
DEVWNKAPEL  KINRYQTAWH  GADGTARVLY  DENNLYVLIK  VNDTQLDKGS  PNPWEQDSVE780
IFIDENNAKT  SFYEEDDGQY  RVNFENETSF  NPESIAGGFE  SAAEVSGTNY  TLEVKIPFRT840
VKPVSNMQIG  FDVQINDGKN  GVRQSIATWN  DPTGNAWQDT  SVFGILTLKS  KNPVTRGEAI900
VKIMKAYDME  PLENWNDNFS  DASGSYAGYY  ARAKETGFVS  GIGDNKIGAE  IPLTREMFFT960
MIYNIERITG  KMQGIDISDA  ELTLFSDYND  LSEWAEEAVK  ALVKSGRIKI  NGDLLPKALM1020
DAEEVEAFLR  LR1032

Predicted 3D structure by AlphaFold2 with pLDDT = 90.17 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM22(33-153)+CBM22(200-328)+GH10(358-689)+CBM9(716-888)

MNGRNGGKRP  IASLLVLTLA  FLFIPVTKAE  TTVYHETFAE  GKGAAVQSGG  ATITHVTGKF60
FDGNGDGAAL  YISNRVNNWD  AADFRFSDIG  LQDGRIYKIT  VKGYVDPDVH  VPEGSQIWLQ120
TVNSYGWWGS  TDIKAGEAFT  LTGVYKVDTT  NDYALRIQSN  DTGAFVPFYI  GEILITEETV180
PQDDSRNGNK  THAEKFTPIT  FEDQTTGGFT  GRAGTEILTV  TDEANHTDGG  RYSLKVGGRN240
DTWHGPALRV  EKYVDQGYEY  KVAVYVRLIS  PESAQLQLST  QIGEGTSASY  VNLAKKNVAI300
SDGWVLLEGT  YRYDNLGGGY  LTIYVESPDS  PEASFYIDDI  NFEPTGMKSE  EIEKGLKSLK360
DVYKDNFLTG  TAISLRDLEG  VRFELLKKHF  NAVTAENAMK  PSELQREKGN  FTFDGADRLV420
NAAISAGMKV  HGHTLVWHQQ  TPAWMNIKLD  SGGNIVYLSR  EEALENMRNH  IRTVIEHFGD480
KVISWDVVNE  AMSDNPSNPS  DWRGSLRKSP  WYYAIGEDYV  EQAFLAAREV  LDEHPEWDIK540
LYYNDYNLDN  QNKALAVYNM  VRELNEKYQK  THPGKLLIDG  IGMQGHYSVN  TNPKNVELSL600
KRFTELGVEV  SISELDIRAG  SNYQLTEKEA  NAQAYLYAQL  FKIFREYSDS  IARVTFWGMD660
DGTSWRAEES  PLLFDRTLKA  KPAYYAVADP  DEFIEKYKPE  TIEANRAYAV  YGTPEIDGKT720
DEVWNKAPEL  KINRYQTAWH  GADGTARVLY  DENNLYVLIK  VNDTQLDKGS  PNPWEQDSVE780
IFIDENNAKT  SFYEEDDGQY  RVNFENETSF  NPESIAGGFE  SAAEVSGTNY  TLEVKIPFRT840
VKPVSNMQIG  FDVQINDGKN  GVRQSIATWN  DPTGNAWQDT  SVFGILTLKS  KNPVTRGEAI900
VKIMKAYDME  PLENWNDNFS  DASGSYAGYY  ARAKETGFVS  GIGDNKIGAE  IPLTREMFFT960
MIYNIERITG  KMQGIDISDA  ELTLFSDYND  LSEWAEEAVK  ALVKSGRIKI  NGDLLPKALM1020
DAEEVEAFLR  LR1032

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help