CAZyme3D

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Entry ID

Information for CAZyme ID: ANU59117.1

Basic Information

GenBank IDANU59117.1
FamilyGH76
Sequence Length515
UniProt IDA0A1C7H6D1(100,100)Download
Average pLDDT?89.07
CAZy50 ID65794
CAZy50 RepNo, QUT40875.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1796613
KingdomBacteria
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides caecimuris

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKNIRFNILL  GICFFLLSAL  LGACGGGDSP  ITDEIDDGKQ  DGQGQKTVPP  VTNLVAEKTE60
RANELKVSWT  NPVGAISVEI  SYLLEGDKPE  NTVKKNIRIT  TERVGSLLIV  VSEPGTYIVT120
AVAVDNYGRR  SEKSAVTATP  LREEEVVRTR  FLERADILMT  SLMNLCFGKS  ARDCWNTKYP180
LATGPYWDGD  AVVWDQGAGF  SGYVALRGAS  VGVSAYEKKY  ADLTDRMFNS  INRFITTDNK240
RSAYAVYPQN  GNERYYDDNV  WIGLDMAELY  EQTKENRFLE  KAKMVWDYLM  VGNTSSCGGG300
ILWREIPAYS  NKHTCSTAPA  AVLGCKLYQI  TKEQKYLDKA  KEFYAWLIQY  MQDPSDHLFY360
DNITPSMTIG  KSKYSYNSGQ  PMQAACLLYK  ITGEQQYLNE  AQRIARSAHS  KWFTLYDSKE420
LGERFYRING  DHVWFYSILF  RGFLELYKID  GRRDYVTAFE  KSMLQAWMSE  CRNQTTNLLS480
NNYFIGKTNS  SWQVLHEGAF  VEMLARLAVL  ELEGK515

Predicted 3D structure by AlphaFold2 with pLDDT = 89.07 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH76(176-484)

MKNIRFNILL  GICFFLLSAL  LGACGGGDSP  ITDEIDDGKQ  DGQGQKTVPP  VTNLVAEKTE60
RANELKVSWT  NPVGAISVEI  SYLLEGDKPE  NTVKKNIRIT  TERVGSLLIV  VSEPGTYIVT120
AVAVDNYGRR  SEKSAVTATP  LREEEVVRTR  FLERADILMT  SLMNLCFGKS  ARDCWNTKYP180
LATGPYWDGD  AVVWDQGAGF  SGYVALRGAS  VGVSAYEKKY  ADLTDRMFNS  INRFITTDNK240
RSAYAVYPQN  GNERYYDDNV  WIGLDMAELY  EQTKENRFLE  KAKMVWDYLM  VGNTSSCGGG300
ILWREIPAYS  NKHTCSTAPA  AVLGCKLYQI  TKEQKYLDKA  KEFYAWLIQY  MQDPSDHLFY360
DNITPSMTIG  KSKYSYNSGQ  PMQAACLLYK  ITGEQQYLNE  AQRIARSAHS  KWFTLYDSKE420
LGERFYRING  DHVWFYSILF  RGFLELYKID  GRRDYVTAFE  KSMLQAWMSE  CRNQTTNLLS480
NNYFIGKTNS  SWQVLHEGAF  VEMLARLAVL  ELEGK515

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help

qseqidqlensseqidpidentevaluelengthqstartqendqcovhspscovhsp
ANU59117.1515QUT40875.196.10.05151515100100