CAZyme3D

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Entry ID

Information for CAZyme ID: ANR73805.1

Basic Information

GenBank IDANR73805.1
FamilyCE4, GH18, GT2
Sequence Length1133
UniProt IDA0A1B1IAJ0(100,100)Download
Average pLDDT?84.38
CAZy50 ID8692
CAZy50 RepNo, AYD47279.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1236518
KingdomBacteria
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella scopos
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A1B1IAJ0.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSKQVFQTDS  RQRWSYFKWT  LRVIITILSL  FGIVFLAMFA  LEGSPQMPFR  HDYRNAISAS60
SAYTKDNKTA  KLYKSFRDFF  KEKKMHNNYA  KATIKKQRFV  GKADSLTQKY  FNEWDDPRIG120
VRSAWYVNWD  KHAYLSLKNN  IKHLNMVLPE  WFFINPKTDK  VEYRIDKQAL  RLMRRAGTPI180
LPMLTNNYDS  DFRPEAIGRI  MRNDKKRMAL  INEMVQKCKQ  YGFAGINLDL  EELNIADNEL240
LNQLVRDFSR  IFHAHGLYVT  QAVAPFNEDY  NMQELAKYND  YLFLMAYDEH  NIESQPGAVS300
SQRWVEKATD  WAAKNVPNDK  IVLGMATYGY  DWANGERGTT  VSFDQTMAIA  QDADTKVRFD360
DDTYNLNFSY  QNTDDKKVHQ  VFFTDAATTF  NIMRFGAEYH  LAGFALWRLG  TEDKRIWRYY420
GKDMSWENVA  RMSIAKLMQL  NGTDDVNFVG  AGEVLSVTSE  PHPGRISVMI  DKDNRLISEE480
YYRALPSTYT  IQRLGACKDK  QLVITFDDGP  DSRWTPTVLS  TLKKYNVPAA  FFMVGLQMEK540
NLPLVRQVYD  AGHTIGNHTF  THHNMIENSD  DRSYAELKLT  RMLIESVTGH  STILFRAPYN600
ADADPTEHEE  IWPMIVAARR  NYLFVGESID  PNDWEPNVTA  DQIYQRVIDG  VHHEDGHIIL660
LHDAGGSTRK  PTLDALPRII  ETLQREGYQF  ISIEQYLGMD  KQTLMPAINK  GKAYYAMQTN720
LWLAEMIYHV  SDFLTALFLV  FLVLGMMRLI  FMYVLMIREK  RVENRRHYSP  IDANTAPAVA780
IIVPGYNEEV  NVVRTLTTLK  QQDYPNLHIY  FVDDGSKDHT  LERVRAAFNN  DDMVTVLAKK840
NGGKASALNY  GIAACPTEYV  VCIDADTQLK  NDAVSRLMKH  FIADKEQRVG  AVAGNVKVGN900
QRNMLTYWQA  IEYTSSQNFD  RMAYSNINAI  TVVPGAIGAF  RKKVIEEVGG  FTTDTLAEDC960
DLTMSINEHG  YIIENENYAV  AMTEAPETLR  QFVKQRIRWC  FGVMQAFWKH  RSSLFAPSKK1020
GFGLWAMPNM  LIFQYIIPTF  SPLADVLMLL  GLFSGNALQI  FFYYLIFLII  DASVSIMAYI1080
FEGEGLWVLL  WVIPQRFFYR  WIMYYVLFKS  YLKAIKGELQ  MWGVLKRTGH  VGE1133

Predicted 3D structure by AlphaFold2 with pLDDT = 84.38 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH18(126-415)+CE4(498-600)+GT2(777-1002)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help