CAZyme3D

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Entry ID

Information for CAZyme ID: ANR71143.1

Basic Information

GenBank IDANR71143.1
FamilyGT51
Sequence Length299
UniProt IDA0A1B1I2Z0(100,100)Download
Average pLDDT?82.49
CAZy50 ID155413
CAZy50 RepNo, AOH48229.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID712528
KingdomBacteria
PhylumBacillota
ClassNegativicutes
OrderSelenomonadales
FamilySelenomonadaceae
GenusSelenomonas
SpeciesSelenomonas sp. oral taxon 126

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTDTINETPP  KRKRRKTTAR  KRTRKKTPRR  FGRFFLSVFI  CLLLVSLGTF  LFVPHAWQEV60
GEILPAAERQ  LPANQLHEIR  EPNAGEQIAR  VLFIRRAIEA  RLDRADYVPI  GRISPELRKA120
IVAIEDRRFY  DHMGFDLTGM  GRAALVNIQH  GRIEEGASTI  TQQLVKNLFL  ANEQTLTRKV180
QELLLALDIE  IAYSKDEILE  MYLNVVYYGS  GFYGVNAAAE  GYYGKPPAAL  DLPEASMLAG240
IPNAPSELSP  FENFIAAKKR  QAVVLDTMEA  QGMIDARTAE  DAKIQPLNFR  PEESEKTKT299

Predicted 3D structure by AlphaFold2 with pLDDT = 82.49 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(104-269)

MTDTINETPP  KRKRRKTTAR  KRTRKKTPRR  FGRFFLSVFI  CLLLVSLGTF  LFVPHAWQEV60
GEILPAAERQ  LPANQLHEIR  EPNAGEQIAR  VLFIRRAIEA  RLDRADYVPI  GRISPELRKA120
IVAIEDRRFY  DHMGFDLTGM  GRAALVNIQH  GRIEEGASTI  TQQLVKNLFL  ANEQTLTRKV180
QELLLALDIE  IAYSKDEILE  MYLNVVYYGS  GFYGVNAAAE  GYYGKPPAAL  DLPEASMLAG240
IPNAPSELSP  FENFIAAKKR  QAVVLDTMEA  QGMIDARTAE  DAKIQPLNFR  PEESEKTKT299

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help