CAZyme3D

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Entry ID

Information for CAZyme ID: ANJ07911.1

Basic Information

GenBank IDANJ07911.1
FamilyCBM50, GH23
Sequence Length342
UniProt IDA0A191UYS5(100,100)Download
Average pLDDT?63.38
CAZy50 ID130387
CAZy50 RepNo, QFR94015.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID146923
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces parvulus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLSGNGRHRR  PRQAPALVVA  AGVTGSAIAI  PLLGATGAHA  AGANWDQIAE  CETGGAWSQN60
AGNGYYGGLQ  LPQEAWERYG  GLEYAASADQ  ASRSQQIRIA  EKLYADQGIA  AWPTCGLLAG120
LGNPPGATGA  TGATGDGSSE  ESRSTEEPET  PESAGSSAGS  KTPESTASSK  TPDSSESSAS180
PSPSESTEGS  DSSPKTSGSS  PSPSTSPSSG  TSDAPSDGMD  QSAKPDTSPE  SDSRATAEPD240
GADRSSGSGK  HRGGSADEGG  RWKGLTDSTS  GRHASRDGGS  READDGSYMV  RSGDNLWAIA300
DSLGVDGGWR  ALYSDNERVV  GQDPDHILPG  QTLTVTGESG  EK342

Predicted 3D structure by AlphaFold2 with pLDDT = 63.38 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM50(288-335)

MLSGNGRHRR  PRQAPALVVA  AGVTGSAIAI  PLLGATGAHA  AGANWDQIAE  CETGGAWSQN60
AGNGYYGGLQ  LPQEAWERYG  GLEYAASADQ  ASRSQQIRIA  EKLYADQGIA  AWPTCGLLAG120
LGNPPGATGA  TGATGDGSSE  ESRSTEEPET  PESAGSSAGS  KTPESTASSK  TPDSSESSAS180
PSPSESTEGS  DSSPKTSGSS  PSPSTSPSSG  TSDAPSDGMD  QSAKPDTSPE  SDSRATAEPD240
GADRSSGSGK  HRGGSADEGG  RWKGLTDSTS  GRHASRDGGS  READDGSYMV  RSGDNLWAIA300
DSLGVDGGWR  ALYSDNERVV  GQDPDHILPG  QTLTVTGESG  EK342

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help