CAZyme3D

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Entry ID

Information for CAZyme ID: ANF98606.1

Basic Information

GenBank IDANF98606.1
FamilyGH3
Sequence Length945
UniProt IDA0A172ZLU9(100,100)Download
Average pLDDT?94.47
CAZy50 ID965
CAZy50 RepNo, WHY18604.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1616788
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyPaenibacillaceae
GenusPaenibacillus
SpeciesPaenibacillus bovis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MFDHQTTYDS  GGNTLTTPTT  SQIGVPLEGF  AEFSRRVAAE  GAVLLQNNNQ  VLPLKKNESV60
SIFGRVQVDY  YRSGTGSGGS  VNVAYTTNLL  EGLRSKTDIR  VNEQLAQVYE  QWIQENPFDN120
GGGGWAAEPW  HQQEMTLTDE  LVAQARQQSD  KAIIVIGRTA  GEDKDNADAP  GSYRLTDNEL180
NMLKQVTAHF  EQTAVVLNVS  NIVDMSWVQD  ESHIHPISAV  IYSWHGGMEG  GNAIADVLVG240
EVTPSGKLPD  TIAYSIDDYP  STKNYGNEHQ  SLYEEDIYVG  YRYFETFAPE  KVQYAFGYGL300
SYTSFDVQPE  EAQLVSHEGQ  EYIEIGVQVT  NTGTAYAGKE  VVQIYYEAPQ  GQLGQPARSL360
AAFGKTGLLQ  PGESERLVIT  FPVHSMASYD  DSGITGHAHA  YVLEEGIYRF  YAGSSIRQLD420
AVKWAGGEGY  EVASLQVVEQ  LQEAMAPTVT  FNRIKPGQRL  ENGTYEITYT  EVPKQKISLA480
ERIEQQMPRQ  LEQTGDRGYK  LRDVAEQKVG  MEEFIAQLSD  EDLAAIVRGE  GMSSPLVTPG540
TASAFGGVSD  SLLRYGIPVG  CTADGPSGIR  MDSGDKSTQV  SIGTLLASTW  NVELVEEMYV600
LEGQELVRNH  VDALLGPGMN  IHRSPLNGRN  FEYFSEDPLV  TGQLAAACVR  GIMRGGSNGT660
LKHFACNNQE  QYRSKVDAVV  SERALREIYL  KGYEIAVKQG  GSNCIMTSYN  PVNGHWAASN720
YDLNTTILRG  EWGFQGIVMT  DWWAIMNDVV  NGGPADRKNT  NAMVRAQNDL  YMVVSNYGAE780
TNVWGDNTIE  SLANGTLTRG  ELQRSAINIC  NFLIQAPVFA  RNQVIEETVN  TYAANASLSA840
DQAQPATEDR  QITVDTAAAT  LIHVEQPGVY  RLFAHVMSPD  TELAQSACNL  LLNGEVVTTI900
QTNGTEGRWL  RQKLVKAELA  SGVYEVTFEF  VKPGMQVEWI  ELKRI945

Predicted 3D structure by AlphaFold2 with pLDDT = 94.47 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH3(554-773)

MFDHQTTYDS  GGNTLTTPTT  SQIGVPLEGF  AEFSRRVAAE  GAVLLQNNNQ  VLPLKKNESV60
SIFGRVQVDY  YRSGTGSGGS  VNVAYTTNLL  EGLRSKTDIR  VNEQLAQVYE  QWIQENPFDN120
GGGGWAAEPW  HQQEMTLTDE  LVAQARQQSD  KAIIVIGRTA  GEDKDNADAP  GSYRLTDNEL180
NMLKQVTAHF  EQTAVVLNVS  NIVDMSWVQD  ESHIHPISAV  IYSWHGGMEG  GNAIADVLVG240
EVTPSGKLPD  TIAYSIDDYP  STKNYGNEHQ  SLYEEDIYVG  YRYFETFAPE  KVQYAFGYGL300
SYTSFDVQPE  EAQLVSHEGQ  EYIEIGVQVT  NTGTAYAGKE  VVQIYYEAPQ  GQLGQPARSL360
AAFGKTGLLQ  PGESERLVIT  FPVHSMASYD  DSGITGHAHA  YVLEEGIYRF  YAGSSIRQLD420
AVKWAGGEGY  EVASLQVVEQ  LQEAMAPTVT  FNRIKPGQRL  ENGTYEITYT  EVPKQKISLA480
ERIEQQMPRQ  LEQTGDRGYK  LRDVAEQKVG  MEEFIAQLSD  EDLAAIVRGE  GMSSPLVTPG540
TASAFGGVSD  SLLRYGIPVG  CTADGPSGIR  MDSGDKSTQV  SIGTLLASTW  NVELVEEMYV600
LEGQELVRNH  VDALLGPGMN  IHRSPLNGRN  FEYFSEDPLV  TGQLAAACVR  GIMRGGSNGT660
LKHFACNNQE  QYRSKVDAVV  SERALREIYL  KGYEIAVKQG  GSNCIMTSYN  PVNGHWAASN720
YDLNTTILRG  EWGFQGIVMT  DWWAIMNDVV  NGGPADRKNT  NAMVRAQNDL  YMVVSNYGAE780
TNVWGDNTIE  SLANGTLTRG  ELQRSAINIC  NFLIQAPVFA  RNQVIEETVN  TYAANASLSA840
DQAQPATEDR  QITVDTAAAT  LIHVEQPGVY  RLFAHVMSPD  TELAQSACNL  LLNGEVVTTI900
QTNGTEGRWL  RQKLVKAELA  SGVYEVTFEF  VKPGMQVEWI  ELKRI945

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help