CAZyme3D

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Entry ID

Information for CAZyme ID: ANF49944.1

Basic Information

GenBank IDANF49944.1
FamilyPL10_1
Sequence Length340
UniProt IDA0A172XSM6(100,100)Download
Average pLDDT?94.61
CAZy50 ID132632
CAZy50 RepNo, CDS92379.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1685010
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusChryseobacterium
SpeciesChryseobacterium glaciei

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIKFKISVIA  ASFITATFSA  QIKDTLAEKM  LVYQLPNGGW  GKQLDDKSVV  DYNLPIDKKL60
LSKIKATGDD  HATIDNNATS  REINALIKSY  KTTNNPEYLK  SAEKGINYLL  SMQYKNGGFP120
QYYPNSGMYR  KQITYNDNAM  INALTVLYNV  AEGKNDFDVV  DSKLKEKSKT  AVQKGIDCIL180
KTQVVQKDTP  SIWGDQYNEI  TMQPDKARAF  EPISLATGES  VNIVKFLMMQ  TATPEIQKSI240
KSAIKWFKDN  KIEGYSYNIT  KQNGKAVRTL  AEDKNSVIWA  RFYDINTNKP  LFGDRDGSVK300
YNYNDVSEER  RNGYSWFGDT  PDKLINKEFP  KWAQKNGVML  340

Predicted 3D structure by AlphaFold2 with pLDDT = 94.61 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : PL10_1(34-324)

MIKFKISVIA  ASFITATFSA  QIKDTLAEKM  LVYQLPNGGW  GKQLDDKSVV  DYNLPIDKKL60
LSKIKATGDD  HATIDNNATS  REINALIKSY  KTTNNPEYLK  SAEKGINYLL  SMQYKNGGFP120
QYYPNSGMYR  KQITYNDNAM  INALTVLYNV  AEGKNDFDVV  DSKLKEKSKT  AVQKGIDCIL180
KTQVVQKDTP  SIWGDQYNEI  TMQPDKARAF  EPISLATGES  VNIVKFLMMQ  TATPEIQKSI240
KSAIKWFKDN  KIEGYSYNIT  KQNGKAVRTL  AEDKNSVIWA  RFYDINTNKP  LFGDRDGSVK300
YNYNDVSEER  RNGYSWFGDT  PDKLINKEFP  KWAQKNGVML  340

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help