CAZyme3D

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Entry ID

Information for CAZyme ID: ANE44666.1

Basic Information

GenBank IDANE44666.1
FamilyCBM50
Sequence Length265
UniProt IDA0A172TCI0(100,100)Download
Average pLDDT?80.47
CAZy50 ID134150
CAZy50 RepNo, BBN93306.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1182568
KingdomBacteria
PhylumDeinococcota
ClassDeinococci
OrderDeinococcales
FamilyDeinococcaceae
GenusDeinococcus
SpeciesDeinococcus puniceus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MLGSASSAAT  YRIKPGDTLS  GIAVRAGVTV  AQLRAANPAL  RDANSVQAGR  VLTLPGRVLP60
ATRYRVKAGE  NLTVIAQRVG  LTLTQLVRAN  PKYAGGKPVW  VGAIIQIPAR  TVAARTGTAA120
TVRPAAIRVN  PVSPASSGAW  LWPVAGYRTV  SSDYGSRVLD  GVREMHYGID  IVAPTGTLVR180
AARSGRVLES  RPDFDRGWGW  TVVLEHPDGW  ITRYAHLSAN  LARQGEVVTR  GQPIGRVGNT240
GRSTGPHLHF  GTYLRWSPRD  PLSLY265

Predicted 3D structure by AlphaFold2 with pLDDT = 80.47 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM50(11-55)+CBM50(64-108)

MLGSASSAAT  YRIKPGDTLS  GIAVRAGVTV  AQLRAANPAL  RDANSVQAGR  VLTLPGRVLP60
ATRYRVKAGE  NLTVIAQRVG  LTLTQLVRAN  PKYAGGKPVW  VGAIIQIPAR  TVAARTGTAA120
TVRPAAIRVN  PVSPASSGAW  LWPVAGYRTV  SSDYGSRVLD  GVREMHYGID  IVAPTGTLVR180
AARSGRVLES  RPDFDRGWGW  TVVLEHPDGW  ITRYAHLSAN  LARQGEVVTR  GQPIGRVGNT240
GRSTGPHLHF  GTYLRWSPRD  PLSLY265

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help