CAZyme3D

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Entry ID

Information for CAZyme ID: ANE41300.1

Basic Information

GenBank IDANE41300.1
FamilyGH3
Sequence Length717
UniProt IDA0A172T2V6(100,100)Download
Average pLDDT?97.13
CAZy50 ID18981
CAZy50 RepNo, WHY22245.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID93466
KingdomBacteria
PhylumThermotogota
ClassThermotogae
OrderThermotogales
FamilyFervidobacteriaceae
GenusFervidobacterium
SpeciesFervidobacterium pennivorans

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIIVEFDIER  VISEMTIDEK  ISLLVGAGVL  WLPDNPAPRV  KGEAGETRPI  ERLGIPGMVL60
ADGPAGLRID  PERENDENKY  HATAFPVETM  LASTWNRNLL  RKVGEAMGEE  VKEYGVDILL120
APAINIHRNP  LCGRNFEYYS  EDPLLTGEMA  ASFVEGVQSQ  GVGACLKHFV  VNEQETNRMT180
VDTIVSNRAL  REIYLKPFEI  AIKKAKPWTV  MSSYNKLNGK  YTSQNKWLLK  DVLRDEWGFD240
GLVMTDWFAG  DNAAEQIKSW  NDLLMPGNTY  QIFKHRRPEI  EEIKEAYERG  EITDEMLNER300
VRTILKVLVK  TPSFKGYKYS  NKPNLDEHAK  VSYEAGCEGV  VLLKNENVLP  LSPNTKIALF360
GTGQIETIRG  GTGSGETHPR  YTINFLDGAI  EKGLRVDMEL  AEFYRKKVSD  FRATDYVVTK420
GQWGEDIIPR  LPQDFLSKED  IEKYASRNDV  GIFIITRISG  EGVDRKLEKG  DFYLTDDELS480
IISKLSTTFR  NQGKKFVVVL  NIGSPIEVES  WKNLCDAILL  VWQPGQEAGR  IFADVISGKV540
NPSGKLPTTF  PKRYEDVPSR  SFPGEPKDNP  QVVVYDEDIY  VGYRYYDTFR  VEPAFEFGFG600
LSYTTFEYSN  LKLYRDGGDI  VVTFEIKNTG  NMAGKEVAQI  YVRAPRGKID  KPYQELKGFE660
KTKLLEPGET  QKMEIRVPVS  SLASFNGHCW  IVEKGEYEIR  VGASSRDIRL  VGKYVLD717

Predicted 3D structure by AlphaFold2 with pLDDT = 97.13 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH3(50-265)

MIIVEFDIER  VISEMTIDEK  ISLLVGAGVL  WLPDNPAPRV  KGEAGETRPI  ERLGIPGMVL60
ADGPAGLRID  PERENDENKY  HATAFPVETM  LASTWNRNLL  RKVGEAMGEE  VKEYGVDILL120
APAINIHRNP  LCGRNFEYYS  EDPLLTGEMA  ASFVEGVQSQ  GVGACLKHFV  VNEQETNRMT180
VDTIVSNRAL  REIYLKPFEI  AIKKAKPWTV  MSSYNKLNGK  YTSQNKWLLK  DVLRDEWGFD240
GLVMTDWFAG  DNAAEQIKSW  NDLLMPGNTY  QIFKHRRPEI  EEIKEAYERG  EITDEMLNER300
VRTILKVLVK  TPSFKGYKYS  NKPNLDEHAK  VSYEAGCEGV  VLLKNENVLP  LSPNTKIALF360
GTGQIETIRG  GTGSGETHPR  YTINFLDGAI  EKGLRVDMEL  AEFYRKKVSD  FRATDYVVTK420
GQWGEDIIPR  LPQDFLSKED  IEKYASRNDV  GIFIITRISG  EGVDRKLEKG  DFYLTDDELS480
IISKLSTTFR  NQGKKFVVVL  NIGSPIEVES  WKNLCDAILL  VWQPGQEAGR  IFADVISGKV540
NPSGKLPTTF  PKRYEDVPSR  SFPGEPKDNP  QVVVYDEDIY  VGYRYYDTFR  VEPAFEFGFG600
LSYTTFEYSN  LKLYRDGGDI  VVTFEIKNTG  NMAGKEVAQI  YVRAPRGKID  KPYQELKGFE660
KTKLLEPGET  QKMEIRVPVS  SLASFNGHCW  IVEKGEYEIR  VGASSRDIRL  VGKYVLD717

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help