CAZyme3D

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Entry ID

Information for CAZyme ID: AND28683.1

Basic Information

GenBank IDAND28683.1
FamilyCBM13
Sequence Length525
UniProt IDQ8KNU9(100,100)Download
Average pLDDT?91.20
CAZy50 ID63749
CAZy50 RepNo, QBP15698.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1430
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus thuringiensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MAQSEFNQNL  REQGQSRARV  IILRVNNPGY  NTNTLDIADI  EDIIHLPQAI  ELANAFQSAL60
VPTTSNFGED  TLRFDVERGL  GIATHVYPRA  INVNYVTRTL  SQTNNQVQSM  INKVIEELKS120
LLGINLANSV  LQQLTTVITE  TFTNLYVQQQ  SAWLFWGRQT  SSQTNYTYNI  VFAIQNAQTG180
SFMKAIPIGF  EISAYIARER  LLFFNIQDYA  SYSVKIHAIQ  VMQPLIHESF  QPLRGIFNII240
TSVNNRSAIQ  ITEYYDENTH  DYPVKLWDYN  NIINQKWILV  FNQTTRAYSI  QNLIARYLVL300
TWDSTPGSNK  VFASTNRWND  SQFWILESTA  DGSIFLTNMK  DTQFVLEIEN  SSTTNGTNVI360
VNRKNNNAQQ  KFYLNKVNQE  FQDGVYKIKT  ALNNSSVLQM  SEDYFGYTSD  YFVKLWTNNN420
NDINQKWIFE  FDSTKSAYQI  KSQRDPSLVL  AWTWSVPTVK  LPIPNNDDHL  WFLQNAGSGT480
YYFVNMTDTR  YVLEVASSST  TNGTILTINK  RNGNLNQKFL  LDMIN525

Predicted 3D structure by AlphaFold2 with pLDDT = 91.20 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM13(244-397)+CBM13(386-521)

MAQSEFNQNL  REQGQSRARV  IILRVNNPGY  NTNTLDIADI  EDIIHLPQAI  ELANAFQSAL60
VPTTSNFGED  TLRFDVERGL  GIATHVYPRA  INVNYVTRTL  SQTNNQVQSM  INKVIEELKS120
LLGINLANSV  LQQLTTVITE  TFTNLYVQQQ  SAWLFWGRQT  SSQTNYTYNI  VFAIQNAQTG180
SFMKAIPIGF  EISAYIARER  LLFFNIQDYA  SYSVKIHAIQ  VMQPLIHESF  QPLRGIFNII240
TSVNNRSAIQ  ITEYYDENTH  DYPVKLWDYN  NIINQKWILV  FNQTTRAYSI  QNLIARYLVL300
TWDSTPGSNK  VFASTNRWND  SQFWILESTA  DGSIFLTNMK  DTQFVLEIEN  SSTTNGTNVI360
VNRKNNNAQQ  KFYLNKVNQE  FQDGVYKIKT  ALNNSSVLQM  SEDYFGYTSD  YFVKLWTNNN420
NDINQKWIFE  FDSTKSAYQI  KSQRDPSLVL  AWTWSVPTVK  LPIPNNDDHL  WFLQNAGSGT480
YYFVNMTDTR  YVLEVASSST  TNGTILTINK  RNGNLNQKFL  LDMIN525

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help