CAZyme3D

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Entry ID

Information for CAZyme ID: AMR61033.1

Basic Information

GenBank IDAMR61033.1
FamilyGH32
Sequence Length479
UniProt IDA0A7U5D3X2(100,100)Download
Average pLDDT?97.26
CAZy50 ID69961
CAZy50 RepNo, AMW99178.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1496303
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus subtilis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTKHDQELRR  RAYEEMERKE  HIVKMDPYRQ  HFHLMPPVGL  MNDPNGVIHW  KGIYHLFFQW60
QPFHTGHGAK  FWGHYSTTDL  VNWVWEEIAL  APSEWYDKNG  CYSGSAVRKD  GQLYLFYTGN120
VRDQDGNRET  YQCLAVSDDG  RTFEKKGVVA  RLPEGYTAHF  RDPKVWEHDG  KWYMVIGAQT180
ENLKGSAVLF  ISDNLTEWTF  LGPITGPGFN  GLKDFGYMWE  CPDLFSLQGH  DVLLVSPQGL240
YAEGIHFQNV  NQSGYFVGRL  DYDKPEMKHG  GFTELDRGFD  FYAHQTLEDE  RGRRIMFAWM300
GVPGQDETSH  PTIENHWIHC  MTLPRLLTLS  GEKLIQQPLP  ELKAMRTNEQ  TIDVKLHQSN360
EALPVEDVER  TEILIENIQT  LSGFEFDIRK  AARFIFRKDE  GLVTLKRVSF  DGEKMEERHC420
HINRLHTLHM  FIDASSLEIF  INEGEEVFSA  RYFPSLENHE  VTVKSNGDTG  MKVSVWALN479

Predicted 3D structure by AlphaFold2 with pLDDT = 97.26 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH32(33-338)

MTKHDQELRR  RAYEEMERKE  HIVKMDPYRQ  HFHLMPPVGL  MNDPNGVIHW  KGIYHLFFQW60
QPFHTGHGAK  FWGHYSTTDL  VNWVWEEIAL  APSEWYDKNG  CYSGSAVRKD  GQLYLFYTGN120
VRDQDGNRET  YQCLAVSDDG  RTFEKKGVVA  RLPEGYTAHF  RDPKVWEHDG  KWYMVIGAQT180
ENLKGSAVLF  ISDNLTEWTF  LGPITGPGFN  GLKDFGYMWE  CPDLFSLQGH  DVLLVSPQGL240
YAEGIHFQNV  NQSGYFVGRL  DYDKPEMKHG  GFTELDRGFD  FYAHQTLEDE  RGRRIMFAWM300
GVPGQDETSH  PTIENHWIHC  MTLPRLLTLS  GEKLIQQPLP  ELKAMRTNEQ  TIDVKLHQSN360
EALPVEDVER  TEILIENIQT  LSGFEFDIRK  AARFIFRKDE  GLVTLKRVSF  DGEKMEERHC420
HINRLHTLHM  FIDASSLEIF  INEGEEVFSA  RYFPSLENHE  VTVKSNGDTG  MKVSVWALN479

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help