CAZyme3D

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Entry ID

Information for CAZyme ID: AMG51286.1

Basic Information

GenBank IDAMG51286.1
FamilyGH36
Sequence Length745
UniProt IDA0A0X8PS61(100,100)Download
Average pLDDT?95.86
CAZy50 ID31140
CAZy50 RepNo, AZZ22616.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1353
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusEnterococcus
SpeciesEnterococcus gallinarum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MIEIKNEQLF  HLYNEKISYI  INVLPNQQLG  HVYFGPSLGT  LAPFDQAYLE  KKENKSAGTV60
KFFEADNLFT  LADRFQELPT  YGTSDFREGA  VSVFEEETPL  YVDFKLVAFH  CFEGKERKLA120
QPASFAAADE  SQSIVFELVD  QERQLELAIT  YTIFKGSGTI  TRQQTLTNTG  SKPRTIQRFL180
SGVLELKNRD  FELLHLSGAW  LKERHIKTVP  LTQGTISVGS  LKGASGHQHN  PFVALKEQQA240
TNDTGHVYGA  NLIYSGNFLA  QAEMDEWDNV  RLMLGIHPER  FSWQLSQGET  FEAPECLFTF300
TAAGLNGLSQ  ESAQFIEKHV  IAPYWQKRQR  PIVFNNWEAT  YFDFNEEKLL  TLAQESKALG360
MECFVLDDGW  FGKRNNDRSS  LGDWVADPAK  FPKGIGSFAE  KIHAMQLQLG  IWFEPEMVSP420
DSQLYQEHPE  WVVKHPYERI  SVGRGQYVLD  FANPAVVEAI  FEAMQKVILE  TKLDYIKWDM480
NRNITEAYSP  YLAEQGISQT  EFYHRYILGL  YRLYEKILAA  FPTLLIEGCA  GGGGRYDLGI540
LFYSPQIWPS  DDSDAVERLA  IQSGTLLGYP  LSSFSNHVSA  APNHQVGRTT  SLAFRQTVAM600
FGPLGYELDL  FHLSDAEKQA  IKSQIVFYKK  QRQLLTFGTF  YQLQQLEHAN  EKTWAVYDPQ660
NEEALVAFFR  VLAQANPTAE  DFLPAAFLDG  QQVYQVNGEP  VSGQLLRQLG  LRKPYQFNAV720
NHGTAQVTGD  FQSFVYHLQA  KKGAE745

Predicted 3D structure by AlphaFold2 with pLDDT = 95.86 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH36(9-711)

MIEIKNEQLF  HLYNEKISYI  INVLPNQQLG  HVYFGPSLGT  LAPFDQAYLE  KKENKSAGTV60
KFFEADNLFT  LADRFQELPT  YGTSDFREGA  VSVFEEETPL  YVDFKLVAFH  CFEGKERKLA120
QPASFAAADE  SQSIVFELVD  QERQLELAIT  YTIFKGSGTI  TRQQTLTNTG  SKPRTIQRFL180
SGVLELKNRD  FELLHLSGAW  LKERHIKTVP  LTQGTISVGS  LKGASGHQHN  PFVALKEQQA240
TNDTGHVYGA  NLIYSGNFLA  QAEMDEWDNV  RLMLGIHPER  FSWQLSQGET  FEAPECLFTF300
TAAGLNGLSQ  ESAQFIEKHV  IAPYWQKRQR  PIVFNNWEAT  YFDFNEEKLL  TLAQESKALG360
MECFVLDDGW  FGKRNNDRSS  LGDWVADPAK  FPKGIGSFAE  KIHAMQLQLG  IWFEPEMVSP420
DSQLYQEHPE  WVVKHPYERI  SVGRGQYVLD  FANPAVVEAI  FEAMQKVILE  TKLDYIKWDM480
NRNITEAYSP  YLAEQGISQT  EFYHRYILGL  YRLYEKILAA  FPTLLIEGCA  GGGGRYDLGI540
LFYSPQIWPS  DDSDAVERLA  IQSGTLLGYP  LSSFSNHVSA  APNHQVGRTT  SLAFRQTVAM600
FGPLGYELDL  FHLSDAEKQA  IKSQIVFYKK  QRQLLTFGTF  YQLQQLEHAN  EKTWAVYDPQ660
NEEALVAFFR  VLAQANPTAE  DFLPAAFLDG  QQVYQVNGEP  VSGQLLRQLG  LRKPYQFNAV720
NHGTAQVTGD  FQSFVYHLQA  KKGAE745

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help