Information for CAZyme ID: AMG51286.1
Basic Information
GenBank ID | AMG51286.1 |
Family | GH36 |
Sequence Length | 745 |
UniProt ID | A0A0X8PS61(100,100)![]() |
Average pLDDT? | 95.86 |
CAZy50 ID | 31140 |
CAZy50 Rep | No, AZZ22616.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1353 |
Kingdom | Bacteria |
Phylum | Bacillota |
Class | Bacilli |
Order | Lactobacillales |
Family | Enterococcaceae |
Genus | Enterococcus |
Species | Enterococcus gallinarum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MIEIKNEQLF HLYNEKISYI INVLPNQQLG HVYFGPSLGT LAPFDQAYLE KKENKSAGTV | 60 |
KFFEADNLFT LADRFQELPT YGTSDFREGA VSVFEEETPL YVDFKLVAFH CFEGKERKLA | 120 |
QPASFAAADE SQSIVFELVD QERQLELAIT YTIFKGSGTI TRQQTLTNTG SKPRTIQRFL | 180 |
SGVLELKNRD FELLHLSGAW LKERHIKTVP LTQGTISVGS LKGASGHQHN PFVALKEQQA | 240 |
TNDTGHVYGA NLIYSGNFLA QAEMDEWDNV RLMLGIHPER FSWQLSQGET FEAPECLFTF | 300 |
TAAGLNGLSQ ESAQFIEKHV IAPYWQKRQR PIVFNNWEAT YFDFNEEKLL TLAQESKALG | 360 |
MECFVLDDGW FGKRNNDRSS LGDWVADPAK FPKGIGSFAE KIHAMQLQLG IWFEPEMVSP | 420 |
DSQLYQEHPE WVVKHPYERI SVGRGQYVLD FANPAVVEAI FEAMQKVILE TKLDYIKWDM | 480 |
NRNITEAYSP YLAEQGISQT EFYHRYILGL YRLYEKILAA FPTLLIEGCA GGGGRYDLGI | 540 |
LFYSPQIWPS DDSDAVERLA IQSGTLLGYP LSSFSNHVSA APNHQVGRTT SLAFRQTVAM | 600 |
FGPLGYELDL FHLSDAEKQA IKSQIVFYKK QRQLLTFGTF YQLQQLEHAN EKTWAVYDPQ | 660 |
NEEALVAFFR VLAQANPTAE DFLPAAFLDG QQVYQVNGEP VSGQLLRQLG LRKPYQFNAV | 720 |
NHGTAQVTGD FQSFVYHLQA KKGAE | 745 |
Predicted 3D structure by AlphaFold2 with pLDDT = 95.86 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH36(9-711)
MIEIKNEQLF HLYNEKISYI INVLPNQQLG HVYFGPSLGT LAPFDQAYLE KKENKSAGTV | 60 |
KFFEADNLFT LADRFQELPT YGTSDFREGA VSVFEEETPL YVDFKLVAFH CFEGKERKLA | 120 |
QPASFAAADE SQSIVFELVD QERQLELAIT YTIFKGSGTI TRQQTLTNTG SKPRTIQRFL | 180 |
SGVLELKNRD FELLHLSGAW LKERHIKTVP LTQGTISVGS LKGASGHQHN PFVALKEQQA | 240 |
TNDTGHVYGA NLIYSGNFLA QAEMDEWDNV RLMLGIHPER FSWQLSQGET FEAPECLFTF | 300 |
TAAGLNGLSQ ESAQFIEKHV IAPYWQKRQR PIVFNNWEAT YFDFNEEKLL TLAQESKALG | 360 |
MECFVLDDGW FGKRNNDRSS LGDWVADPAK FPKGIGSFAE KIHAMQLQLG IWFEPEMVSP | 420 |
DSQLYQEHPE WVVKHPYERI SVGRGQYVLD FANPAVVEAI FEAMQKVILE TKLDYIKWDM | 480 |
NRNITEAYSP YLAEQGISQT EFYHRYILGL YRLYEKILAA FPTLLIEGCA GGGGRYDLGI | 540 |
LFYSPQIWPS DDSDAVERLA IQSGTLLGYP LSSFSNHVSA APNHQVGRTT SLAFRQTVAM | 600 |
FGPLGYELDL FHLSDAEKQA IKSQIVFYKK QRQLLTFGTF YQLQQLEHAN EKTWAVYDPQ | 660 |
NEEALVAFFR VLAQANPTAE DFLPAAFLDG QQVYQVNGEP VSGQLLRQLG LRKPYQFNAV | 720 |
NHGTAQVTGD FQSFVYHLQA KKGAE | 745 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.