Information for CAZyme ID: ALV22864.1
Basic Information
| GenBank ID | ALV22864.1 |
| Family | CBM50, GH73 |
| Sequence Length | 1276 |
| UniProt ID | A0A0U3PRC3(100,100) |
| Average pLDDT? | 52.49 |
| CAZy50 ID | 5264 |
| CAZy50 Rep | No, QQP70755.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1564681 |
| Kingdom | Bacteria |
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Carnobacterium |
| Species | Carnobacterium sp. CP1 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
Predicted 3D structure by AlphaFold2 with pLDDT = 52.49 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM50(381-421)+GH73(456-597)+CBM50(634-675)+CBM50(701-742)+CBM50(768-809)+CBM50(835-876)+CBM50(900-941)+CBM50(967-1008)+CBM50(1034-1075)+CBM50(1099-1140)+CBM50(1174-1215)+CBM50(1234-1275)
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.