Information for CAZyme ID: ALU45629.1
Basic Information
GenBank ID | ALU45629.1 |
Family | AA10, CBM5 |
Sequence Length | 478 |
UniProt ID | A0A0U2PEW5(100,100)![]() |
Average pLDDT? | 90.66 |
CAZy50 ID | 61850 |
CAZy50 Rep | No, AOT10364.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 43658 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Alteromonadales |
Family | Pseudoalteromonadaceae |
Genus | Pseudoalteromonas |
Species | Pseudoalteromonas rubra |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MKTYKLLSQQ SAISALVLSA LCYSDLAASH GYMDFPLARQ AICEDQGGYW WPEDGSNIPN | 60 |
AACRAAYLES GYVQFIQEHE FAVNTPDYNN QQAVEKNIPD GTLCAAGSHE KRGMNLPSAD | 120 |
WQKTDVRPNA NGELAIRFHA TTPHNPSFWK FYLTKPGFNP ATDVMTWGSI DLITEIGNVD | 180 |
FVKDPDGKRI YEMTIQIPQG RSGDAILYTR WQRNDVVGEG FYNCSDINIV SDSQPTDWYA | 240 |
AGYFVSRGQT ANAGDLVWAR VFDQNGQEIV KHSLAVTAQN QANWESVLAG QLNATYANDV | 300 |
QVGVKQANGD VLFDEANLLS NQVFVTDAAY TYNLTIVPKA PNTPPTVHQP DPVVMDENAQ | 360 |
VQVHVHAFDD EQTELVYNWT LPAGLSMAGS GATISIQSGE VSADTQYTVS VAVSDGELVT | 420 |
SIDFTVTVKD VPVSTFPQWK ASKTYVGGDK VSHGNKNYEA KWWTRGEEPG KAQVWKAL | 478 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.66 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : AA10(30-228)+CBM5(437-475)
MKTYKLLSQQ SAISALVLSA LCYSDLAASH GYMDFPLARQ AICEDQGGYW WPEDGSNIPN | 60 |
AACRAAYLES GYVQFIQEHE FAVNTPDYNN QQAVEKNIPD GTLCAAGSHE KRGMNLPSAD | 120 |
WQKTDVRPNA NGELAIRFHA TTPHNPSFWK FYLTKPGFNP ATDVMTWGSI DLITEIGNVD | 180 |
FVKDPDGKRI YEMTIQIPQG RSGDAILYTR WQRNDVVGEG FYNCSDINIV SDSQPTDWYA | 240 |
AGYFVSRGQT ANAGDLVWAR VFDQNGQEIV KHSLAVTAQN QANWESVLAG QLNATYANDV | 300 |
QVGVKQANGD VLFDEANLLS NQVFVTDAAY TYNLTIVPKA PNTPPTVHQP DPVVMDENAQ | 360 |
VQVHVHAFDD EQTELVYNWT LPAGLSMAGS GATISIQSGE VSADTQYTVS VAVSDGELVT | 420 |
SIDFTVTVKD VPVSTFPQWK ASKTYVGGDK VSHGNKNYEA KWWTRGEEPG KAQVWKAL | 478 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.