Information for CAZyme ID: ALU41792.1
Basic Information
| GenBank ID | ALU41792.1 |
| Family | CBM5, GH18 |
| Sequence Length | 1053 |
| UniProt ID | A0A0U3I2D9(100,100) |
| Average pLDDT? | 90.26 |
| CAZy50 ID | 11770 |
| CAZy50 Rep | No, ALO44308.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 43658 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MQLVNIKKPA VKLSAIALAL MAHHASAAVD CSEIPQWQAG QVYTSGQQVQ QDNIAYLANW | 60 |
| WNRSSPKLRS GQWQEWRKLG ECQGGEQPNQ SPVIDMEQPG SDMSVTEGEK LQFVFSAHDS | 120 |
| DGIVRQVSVY HNDALVKVLD EAPYVLNWKA RVGDHIFHAV AIDDDGAKSV SAKRTVQVAA | 180 |
| LPPEEKNTAP VSRLTAELPN ELEVGSQVRL TLRSHDKEND RLTQVLTLNG QEIKRTELAQ | 240 |
| AHYEWSAASA GRHEFTLQAT DEHGLVSETI TRTFIVKAPG DDKTSQLDCL PAGLYRTPGV | 300 |
| TSAYCDVYDS EGREKMGADH PRRVIGYFTS WRHGQNNQPS YLVNDIPWDK ITHINYAFAH | 360 |
| VNSQNELSIG DPKAEGNAAT NMTWPGEAGV EMDPSLPYTG HFNLLNRYKK QYPHVKTMIS | 420 |
| VGGWAETGGY FDETGTRVNN GGFYTMTTHA DGSVNHDGIR AFVASSVAFL RQYGFDGLDI | 480 |
| DYEYPSSMKD SGHPEDFDIS NQRRAGLNKS YQVLMKSLRE ALDKAGEQDG KHYMLTIASP | 540 |
| SSGYLLRGME TFQTAQYLDF VNIMSYDLHG AWNDHVGHNA PLYDTGKDTE LKTWNVYGTK | 600 |
| EFGGIGYLNT DWAVNYFRGA LPAGRINIGI PYYTRGFKDV RGGENGLWGR APQPDQNACP | 660 |
| KGTGIGEKNK CGNGAIGIDN LWHDIENGQE VAAGSNPLWH AKNLQHGINP SYLADYGLTP | 720 |
| ATDPDDVMRG DYVRHYDDIA VAPWLYNAQK KVFLSMEDTE SMQTKLNYVL EKGLGGVMFW | 780 |
| ELAGDFDYHA DKGEYFMGST MTSLAYNTFN QSGTDYATVQ GDAEFVVPES AVDIRFNAKD | 840 |
| FPVGDQNYPI RPTFAFTNHS ELDLSGATIS FNVPVSTSAI FKSNWNARKK LGMKVEHDAS | 900 |
| NARGNNIGGF DNAFHRFSIT LKNEWGGQLE SFKPGETVNA QVIYYMPITG PVNFVIEKGS | 960 |
| KQYAFTSEYP QLPVAKKSDD TSGGNPPSGT LCEGVELSNI NHYPQWPRTN WAGTPSHALG | 1020 |
| GDMLIHNGYV YKAKWWTNAT PSNGGAWQQV CSL | 1053 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.26 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM5(35-73)+GH18(322-790)+CBM5(1010-1047)
| MQLVNIKKPA VKLSAIALAL MAHHASAAVD CSEIPQWQAG QVYTSGQQVQ QDNIAYLANW | 60 |
| WNRSSPKLRS GQWQEWRKLG ECQGGEQPNQ SPVIDMEQPG SDMSVTEGEK LQFVFSAHDS | 120 |
| DGIVRQVSVY HNDALVKVLD EAPYVLNWKA RVGDHIFHAV AIDDDGAKSV SAKRTVQVAA | 180 |
| LPPEEKNTAP VSRLTAELPN ELEVGSQVRL TLRSHDKEND RLTQVLTLNG QEIKRTELAQ | 240 |
| AHYEWSAASA GRHEFTLQAT DEHGLVSETI TRTFIVKAPG DDKTSQLDCL PAGLYRTPGV | 300 |
| TSAYCDVYDS EGREKMGADH PRRVIGYFTS WRHGQNNQPS YLVNDIPWDK ITHINYAFAH | 360 |
| VNSQNELSIG DPKAEGNAAT NMTWPGEAGV EMDPSLPYTG HFNLLNRYKK QYPHVKTMIS | 420 |
| VGGWAETGGY FDETGTRVNN GGFYTMTTHA DGSVNHDGIR AFVASSVAFL RQYGFDGLDI | 480 |
| DYEYPSSMKD SGHPEDFDIS NQRRAGLNKS YQVLMKSLRE ALDKAGEQDG KHYMLTIASP | 540 |
| SSGYLLRGME TFQTAQYLDF VNIMSYDLHG AWNDHVGHNA PLYDTGKDTE LKTWNVYGTK | 600 |
| EFGGIGYLNT DWAVNYFRGA LPAGRINIGI PYYTRGFKDV RGGENGLWGR APQPDQNACP | 660 |
| KGTGIGEKNK CGNGAIGIDN LWHDIENGQE VAAGSNPLWH AKNLQHGINP SYLADYGLTP | 720 |
| ATDPDDVMRG DYVRHYDDIA VAPWLYNAQK KVFLSMEDTE SMQTKLNYVL EKGLGGVMFW | 780 |
| ELAGDFDYHA DKGEYFMGST MTSLAYNTFN QSGTDYATVQ GDAEFVVPES AVDIRFNAKD | 840 |
| FPVGDQNYPI RPTFAFTNHS ELDLSGATIS FNVPVSTSAI FKSNWNARKK LGMKVEHDAS | 900 |
| NARGNNIGGF DNAFHRFSIT LKNEWGGQLE SFKPGETVNA QVIYYMPITG PVNFVIEKGS | 960 |
| KQYAFTSEYP QLPVAKKSDD TSGGNPPSGT LCEGVELSNI NHYPQWPRTN WAGTPSHALG | 1020 |
| GDMLIHNGYV YKAKWWTNAT PSNGGAWQQV CSL | 1053 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.