Information for CAZyme ID: ALT77767.1
Basic Information
| GenBank ID | ALT77767.1 |
| Family | CBM12, CBM5, GH18 |
| Sequence Length | 572 |
| UniProt ID | A0A0U3EUV5(100,100) |
| Average pLDDT? | 83.35 |
| CAZy50 ID | 23116 |
| CAZy50 Rep | No, UXH79392.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1768242 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Sphaerotilaceae |
| Genus | Roseateles |
| Species | Paucibacter sp. KCTC 42545 |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MNKLSLIALA VLANSAFALS PAWKPDTFYA AGAVVSYQNN EYRALVNQVD YLSTGWNPSN | 60 |
| TALWVLVSAG GGGNPAPAPS PAPAPSPAPA PTPTPPAPGG SGGTCALLWD ANQVYLGGQT | 120 |
| VSLNGVSYKA NWWTRGDSPV TASGPAGSGK PWTTLGACSG SAPAPSPAPS PAPTPAPSPA | 180 |
| PTPAPSPAPT PAPAPAPTPS GKLPAEALSA NATGRVYVGY YPSWSDNWFD ASGKTAAEVY | 240 |
| AASKFARIPA NYSHVMISFA DPSFSWAGLS SNTWSGTGIN FNGRPSDIKA AIDILHQRNI | 300 |
| KVILAVGGAT YGNWAALAAE GQAGKGTIIN SLAQIMRDLN LDGLDVDYEL DNNVDQYANA | 360 |
| TKAMRKAVDL AGNGRILSAA GWSTGADCTA VTSAQASCLG RLSYWGGNAG RERQLAALYP | 420 |
| AVAQGLDMVN VMSYDARFEN YDGVTAWNDY RGLFSSKTIV SIGLESSPEG WAGGNLVVND | 480 |
| VDAQCTGSRN LKTQYGAQLN LPYSVERYSN AVVKSQHPNR NPRDGAMLWS ILKTANGSCG | 540 |
| SAALASPGGI GKRVSEIFGQ GNDPLLQRAE WK | 572 |
Predicted 3D structure by AlphaFold2 with pLDDT = 83.35 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : CBM12(21-49)+CBM5(109-147)+GH18(216-448)
| MNKLSLIALA VLANSAFALS PAWKPDTFYA AGAVVSYQNN EYRALVNQVD YLSTGWNPSN | 60 |
| TALWVLVSAG GGGNPAPAPS PAPAPSPAPA PTPTPPAPGG SGGTCALLWD ANQVYLGGQT | 120 |
| VSLNGVSYKA NWWTRGDSPV TASGPAGSGK PWTTLGACSG SAPAPSPAPS PAPTPAPSPA | 180 |
| PTPAPSPAPT PAPAPAPTPS GKLPAEALSA NATGRVYVGY YPSWSDNWFD ASGKTAAEVY | 240 |
| AASKFARIPA NYSHVMISFA DPSFSWAGLS SNTWSGTGIN FNGRPSDIKA AIDILHQRNI | 300 |
| KVILAVGGAT YGNWAALAAE GQAGKGTIIN SLAQIMRDLN LDGLDVDYEL DNNVDQYANA | 360 |
| TKAMRKAVDL AGNGRILSAA GWSTGADCTA VTSAQASCLG RLSYWGGNAG RERQLAALYP | 420 |
| AVAQGLDMVN VMSYDARFEN YDGVTAWNDY RGLFSSKTIV SIGLESSPEG WAGGNLVVND | 480 |
| VDAQCTGSRN LKTQYGAQLN LPYSVERYSN AVVKSQHPNR NPRDGAMLWS ILKTANGSCG | 540 |
| SAALASPGGI GKRVSEIFGQ GNDPLLQRAE WK | 572 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.