CAZyme3D

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Entry ID

Information for CAZyme ID: ALO97843.1

Basic Information

GenBank IDALO97843.1
FamilyGH85
Sequence Length678
UniProt IDA0A0S2PAY6(100,100)Download
Average pLDDT?93.16
CAZy50 ID30455
CAZy50 RepNo, UKW28111.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID264445
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNPTRRTVLI  AAGAAALTPA  LPVPSAQAAP  RAAAATPPYA  SYWYPDSLPA  GSPGPGITWR60
SLKSWRAADD  PDLAFNAASI  PLAARFTPTP  ANTTARSGQA  RVQALVSFGP  TSANPSQGSA120
TADYYALTHW  AYIDELVFWG  GSAGEGLILA  PNAPIVDAAH  RHGVPVLGNI  FLPPVAYGGQ180
LQWTRDLVQK  DAAGHYPLAA  QLVAVAAAYG  FDGWFVNAET  SGGNTALGTA  MLGFLRELKS240
LAAARGQRVT  WYDAMTVNGT  VSWQGALNSQ  NQAFFQSADD  MFVDFRWSAA  TLAASGTQAD300
RLGRSRYELW  AGVDVESNGS  GTSVNWDAIV  PTGKPHVTSI  GLYRPEWTRN  HLPADQRAPE360
DFHAADDRFW  TGRSLDPSRP  DGSDPWRAPA  VSVADRSTVT  SVPFASVFNT  GHGLRWYEEG420
AVTSEAPWNH  LGLQDRLPSR  RWAVRTAGER  PAVSFDFADA  WRGGSSVLVA  GELDQPAVVD480
LYATRLPIGV  NTVAELTFRS  ESGDVDVELA  VATAEPSAPG  ATPPYTYLAV  SPVNSGIRVR540
SVNGWQTVTV  PLTGLAGTVH  ALGVRLTATA  GPVRWRLGGL  AVRDTVTAPA  APSGARVTAA600
NGGDLRLAWT  AAPGAVRHYT  LHRLLPDGTR  RFLGATGQLA  YFVAGQRPEQ  GETAARFELR660
AVGELYDASA  AVTVTHPW678

Predicted 3D structure by AlphaFold2 with pLDDT = 93.16 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH85(111-417)

MNPTRRTVLI  AAGAAALTPA  LPVPSAQAAP  RAAAATPPYA  SYWYPDSLPA  GSPGPGITWR60
SLKSWRAADD  PDLAFNAASI  PLAARFTPTP  ANTTARSGQA  RVQALVSFGP  TSANPSQGSA120
TADYYALTHW  AYIDELVFWG  GSAGEGLILA  PNAPIVDAAH  RHGVPVLGNI  FLPPVAYGGQ180
LQWTRDLVQK  DAAGHYPLAA  QLVAVAAAYG  FDGWFVNAET  SGGNTALGTA  MLGFLRELKS240
LAAARGQRVT  WYDAMTVNGT  VSWQGALNSQ  NQAFFQSADD  MFVDFRWSAA  TLAASGTQAD300
RLGRSRYELW  AGVDVESNGS  GTSVNWDAIV  PTGKPHVTSI  GLYRPEWTRN  HLPADQRAPE360
DFHAADDRFW  TGRSLDPSRP  DGSDPWRAPA  VSVADRSTVT  SVPFASVFNT  GHGLRWYEEG420
AVTSEAPWNH  LGLQDRLPSR  RWAVRTAGER  PAVSFDFADA  WRGGSSVLVA  GELDQPAVVD480
LYATRLPIGV  NTVAELTFRS  ESGDVDVELA  VATAEPSAPG  ATPPYTYLAV  SPVNSGIRVR540
SVNGWQTVTV  PLTGLAGTVH  ALGVRLTATA  GPVRWRLGGL  AVRDTVTAPA  APSGARVTAA600
NGGDLRLAWT  AAPGAVRHYT  LHRLLPDGTR  RFLGATGQLA  YFVAGQRPEQ  GETAARFELR660
AVGELYDASA  AVTVTHPW678

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help