CAZyme3D

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Entry ID

Information for CAZyme ID: ALN72170.1

Basic Information

GenBank IDALN72170.1
FamilyGH23
Sequence Length289
UniProt IDA0A0S2ELI5(100,100)Download
Average pLDDT?85.06
CAZy50 ID134166
CAZy50 RepNo, BAT31384.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1349819
KingdomBacteria
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyAurantimonadaceae
GenusAureimonas
SpeciesAureimonas sp. AU20

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTRHLLRSAL  VGAALVVAGP  SLALAEDKTG  EKNNPRVAEI  CDLIAENAGA  VGMEPAFFAR60
LIWKESRFDE  SALSPVGAQG  IAQFMPYTAR  ERGLTDPFDK  REALRHSARY  LRDLRAELGS120
WGLAAAAYNG  GINRVKRWMQ  SGGRLPYETE  DYVLSITAQP  AAFFREEKRE  AEVAPLVKDL180
DFALGCRRLP  ILPTRTVFAA  AESAPMRPWG  AQVAGHPNEA  IAVRLYRKLQ  DRYPGVLGGV240
EPIVMRTRPL  SGPRRITAIR  IGANTRGAAD  AFCAKYRGVG  GSCVVMKNR289

Predicted 3D structure by AlphaFold2 with pLDDT = 85.06 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH23(53-166)

MTRHLLRSAL  VGAALVVAGP  SLALAEDKTG  EKNNPRVAEI  CDLIAENAGA  VGMEPAFFAR60
LIWKESRFDE  SALSPVGAQG  IAQFMPYTAR  ERGLTDPFDK  REALRHSARY  LRDLRAELGS120
WGLAAAAYNG  GINRVKRWMQ  SGGRLPYETE  DYVLSITAQP  AAFFREEKRE  AEVAPLVKDL180
DFALGCRRLP  ILPTRTVFAA  AESAPMRPWG  AQVAGHPNEA  IAVRLYRKLQ  DRYPGVLGGV240
EPIVMRTRPL  SGPRRITAIR  IGANTRGAAD  AFCAKYRGVG  GSCVVMKNR289

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help