Information for CAZyme ID: ALM92218.1
Basic Information
| GenBank ID | ALM92218.1 |
| Family | GH2 |
| Sequence Length | 1058 |
| UniProt ID | A0A0S1YP68(100,100) |
| Average pLDDT? | 94.37 |
| CAZy50 ID | 11698 |
| CAZy50 Rep | No, APE04565.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1160720 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Alteromonadaceae |
| Genus | Alteromonas |
| Species | Alteromonas stellipolaris |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MANVAQVVAQ KDWQNPVVFQ RNRVNGHSPL NGFVTQDDAK QNVNAQKQSL NGEWEFRLYP | 60 |
| QPEAVDEDLL SEELSEAANW QPITVPSNWQ MQGFDKPIYC NVKYPFPVNP PEVPSDNPTG | 120 |
| CYRTTFSVTE NALQQRNHIV FEGVNSAFHL WCNGEYVGYS QDSRLPAEFN LTSFLKAGEN | 180 |
| RLAVMVIRWS DGSYLEDQDM WWLSGIFRDV VLVTKPQHHI QDVFATPKLD ACYRDGSLDV | 240 |
| RTAINAPASY TVGIQLFDGE TAVTEQSESG TNNRRIDEKG GWDDVIFQSL AITEPKKWTA | 300 |
| ETPYLYRLVV TLFDDAGDVV VAEGYNIGFR QIDMLDGQLC VNGKPILIRG VNRHEHHESK | 360 |
| GHAVNEADMI EDIKLLKQNN FNAVRTAHYP NHPRWYELCD EYGLYLVDEA NIETHGMFPM | 420 |
| GRLSRDALWA GAYLARYTQM VERDKNHASI IIWSLGNECG HGPNQDAMYG WSKAFDPSRP | 480 |
| VQYEGGGANT TATDIIAPMY ARVDTDVLDD AVPKWAIKKW LSLPGETRPV ILCEYAHAMG | 540 |
| NSLGSFADYW QAFKDYPRLQ GGFIWDWVDQ GLVKHTDGGE AYWAYGGDFG DTDNDRQFCI | 600 |
| NGLLFPDRTP HPALFEAKYC QQHLAFTLKA LEHEQAGRYQ LTITSDYVFR STDNEALHWQ | 660 |
| LLENGECVAS GTKTLSIGPQ SSQTLTIKPN FKFVPDATYH LNIDVVLAND CDWANAGHVL | 720 |
| DTEQFEIANT AGFSVFTSAN TNTGDATNGE NKDEGKAKAQ DKLTVEHTES KVSIQATSNC | 780 |
| FVLNADTGLL TSWLVDGEEQ LSAPLEDNFF RAPLDNDIGV SEVDNPDPNA WESRWRRAGI | 840 |
| GQWQRNCAGV DVVVSTQDVR VTALFNYHYD NALVASTSWC YRVNATGTLD LDVQVKLADA | 900 |
| LPPMPRIGLQ WAVPRSSQAE AKIQWKGLGP FENYPDRLAA ARFGSYSESI ACMHTPYIFP | 960 |
| TDNGLRSNCR ELSINAIKVA GDFHFAVSPY GQKQLDEAKH TCDLTPADNT YVYLDHAHMG | 1020 |
| VGGDDSWSPS THKAFLLEKK AYRYHLSLSA LKASAANF | 1058 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.37 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(36-943)
| MANVAQVVAQ KDWQNPVVFQ RNRVNGHSPL NGFVTQDDAK QNVNAQKQSL NGEWEFRLYP | 60 |
| QPEAVDEDLL SEELSEAANW QPITVPSNWQ MQGFDKPIYC NVKYPFPVNP PEVPSDNPTG | 120 |
| CYRTTFSVTE NALQQRNHIV FEGVNSAFHL WCNGEYVGYS QDSRLPAEFN LTSFLKAGEN | 180 |
| RLAVMVIRWS DGSYLEDQDM WWLSGIFRDV VLVTKPQHHI QDVFATPKLD ACYRDGSLDV | 240 |
| RTAINAPASY TVGIQLFDGE TAVTEQSESG TNNRRIDEKG GWDDVIFQSL AITEPKKWTA | 300 |
| ETPYLYRLVV TLFDDAGDVV VAEGYNIGFR QIDMLDGQLC VNGKPILIRG VNRHEHHESK | 360 |
| GHAVNEADMI EDIKLLKQNN FNAVRTAHYP NHPRWYELCD EYGLYLVDEA NIETHGMFPM | 420 |
| GRLSRDALWA GAYLARYTQM VERDKNHASI IIWSLGNECG HGPNQDAMYG WSKAFDPSRP | 480 |
| VQYEGGGANT TATDIIAPMY ARVDTDVLDD AVPKWAIKKW LSLPGETRPV ILCEYAHAMG | 540 |
| NSLGSFADYW QAFKDYPRLQ GGFIWDWVDQ GLVKHTDGGE AYWAYGGDFG DTDNDRQFCI | 600 |
| NGLLFPDRTP HPALFEAKYC QQHLAFTLKA LEHEQAGRYQ LTITSDYVFR STDNEALHWQ | 660 |
| LLENGECVAS GTKTLSIGPQ SSQTLTIKPN FKFVPDATYH LNIDVVLAND CDWANAGHVL | 720 |
| DTEQFEIANT AGFSVFTSAN TNTGDATNGE NKDEGKAKAQ DKLTVEHTES KVSIQATSNC | 780 |
| FVLNADTGLL TSWLVDGEEQ LSAPLEDNFF RAPLDNDIGV SEVDNPDPNA WESRWRRAGI | 840 |
| GQWQRNCAGV DVVVSTQDVR VTALFNYHYD NALVASTSWC YRVNATGTLD LDVQVKLADA | 900 |
| LPPMPRIGLQ WAVPRSSQAE AKIQWKGLGP FENYPDRLAA ARFGSYSESI ACMHTPYIFP | 960 |
| TDNGLRSNCR ELSINAIKVA GDFHFAVSPY GQKQLDEAKH TCDLTPADNT YVYLDHAHMG | 1020 |
| VGGDDSWSPS THKAFLLEKK AYRYHLSLSA LKASAANF | 1058 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.