CAZyme3D

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Entry ID

Information for CAZyme ID: ALC88548.1

Basic Information

GenBank IDALC88548.1
FamilyGH32
Sequence Length479
UniProt IDA0A0M4G2Q0(100,100)Download
Average pLDDT?95.82
CAZy50 ID69961
CAZy50 RepNo, AMW99178.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1705566
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus sp. FJAT-18017

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSEKEILLIK  EAYNKVDKYK  NKVTQDPYRL  NYHLMPPVGL  LNDPNGLIQY  NGVYHVFYQW60
NPFNTSHGAK  FWGHYTSRDM  VTWREEPIAL  APSEWYERNG  CYSGSAIEAD  GKLYLFYTGN120
VKLEDGTRET  YQCLAVSTDG  IRFEKHGPIL  QLPKGYTAHF  RDPKVWEKDG  RWYMIVGAQT180
QDEKGTAVLF  TSNDLYHWDE  VGRIAGAGMN  GLKEFGYMWE  CPDLIHLNEK  DVLLVSPQGL240
EPYGYYYQNV  FQSGYFVGKL  DYEKADFQHG  PFTELDRGFD  FYAPQTFKDD  SGRTILYAWM300
GITDETEAFQ  PTVENHWVHA  LTIPRELSLR  DGKVYQSPVV  ELKKLRRNPK  VVEFGKTEES360
QGLFEGIKGS  SSELLLEFLN  GKASHFKISF  RNEASLSFNP  DKQEISLQRP  NVKTDSVETR420
ICNINFVTKL  HVFMDHSSLE  IFVNNGEEVF  TARYFPNPKD  ETIKIQGEAE  YRLTHWDLN479

Predicted 3D structure by AlphaFold2 with pLDDT = 95.82 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH32(33-338)

MSEKEILLIK  EAYNKVDKYK  NKVTQDPYRL  NYHLMPPVGL  LNDPNGLIQY  NGVYHVFYQW60
NPFNTSHGAK  FWGHYTSRDM  VTWREEPIAL  APSEWYERNG  CYSGSAIEAD  GKLYLFYTGN120
VKLEDGTRET  YQCLAVSTDG  IRFEKHGPIL  QLPKGYTAHF  RDPKVWEKDG  RWYMIVGAQT180
QDEKGTAVLF  TSNDLYHWDE  VGRIAGAGMN  GLKEFGYMWE  CPDLIHLNEK  DVLLVSPQGL240
EPYGYYYQNV  FQSGYFVGKL  DYEKADFQHG  PFTELDRGFD  FYAPQTFKDD  SGRTILYAWM300
GITDETEAFQ  PTVENHWVHA  LTIPRELSLR  DGKVYQSPVV  ELKKLRRNPK  VVEFGKTEES360
QGLFEGIKGS  SSELLLEFLN  GKASHFKISF  RNEASLSFNP  DKQEISLQRP  NVKTDSVETR420
ICNINFVTKL  HVFMDHSSLE  IFVNNGEEVF  TARYFPNPKD  ETIKIQGEAE  YRLTHWDLN479

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help