CAZyme3D

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Entry ID

Information for CAZyme ID: ALC84299.1

Basic Information

GenBank IDALC84299.1
FamilyCBM66, GH32
Sequence Length666
UniProt IDA0A0M4FL67(100,100)Download
Average pLDDT?93.87
CAZy50 ID40252
CAZy50 RepNo, QYG87522.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1441095
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus gobiensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MVKPKQEAQQ  NDNVTKPPVQ  ANSYYNELYR  PQFHYSPEAN  WMNDPNGMVF  HKGEYHLFYQ60
YHPYDAKWGP  MHWGHAVSKD  LVHWEHRPVA  FTPDHNGDIF  SGSIVVDHNN  TSGFGKDALV120
ALYTQNKDGH  QVQSLAYSTD  DGNTWTKYEG  NPIMKDFPDP  DWRDPKVFWH  EETKSWIMPL180
AAKDKVMLYT  SPNLKDWSFA  SEYKPQNASG  ATLLECPELF  PLPVDGEKDK  QKWVLTTSLG240
DGAIAGGSGM  EYYVGTFDGK  TFTPDKPEAE  WIDYGADFYA  GVTWENAPNN  DQYRTMIAWM300
SNWKYANDTP  TSAWRSAMTV  PRKLELKTSQ  NGEVKLVQSP  IQELETLRGK  EKSYPSQVIK360
PNTNFLANAK  GDTVELVADF  KVDEMTTSKA  FGFRVRKGDD  QATSIGYNNE  KKTIYLDRSF420
SGESYFNDQF  AKVHEAPLEP  VDGHVKMRIL  VDRSSVELFG  NDGQVSITDQ  IFPKGSSDGI480
ELFSSDGDVT  LESLHVYPLN  RIWGNSLFHS  NLSGWEALNG  RWADTISGTQ  GSDTVDSFKL540
ADSRGKDFTY  ETDVKIGNQG  AGGLVFRSDK  TAKNAYVATI  DQPGQMVKLW  KKVDGEASIL600
ATYPAKIDPE  TTNHLKVTTE  GKEIKVHFND  QLAIRTKDNS  LSSGYFGLNV  WNGTSTFQNV660
NTYPKK666

Predicted 3D structure by AlphaFold2 with pLDDT = 93.87 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH32(34-340)+CBM66(510-660)

MVKPKQEAQQ  NDNVTKPPVQ  ANSYYNELYR  PQFHYSPEAN  WMNDPNGMVF  HKGEYHLFYQ60
YHPYDAKWGP  MHWGHAVSKD  LVHWEHRPVA  FTPDHNGDIF  SGSIVVDHNN  TSGFGKDALV120
ALYTQNKDGH  QVQSLAYSTD  DGNTWTKYEG  NPIMKDFPDP  DWRDPKVFWH  EETKSWIMPL180
AAKDKVMLYT  SPNLKDWSFA  SEYKPQNASG  ATLLECPELF  PLPVDGEKDK  QKWVLTTSLG240
DGAIAGGSGM  EYYVGTFDGK  TFTPDKPEAE  WIDYGADFYA  GVTWENAPNN  DQYRTMIAWM300
SNWKYANDTP  TSAWRSAMTV  PRKLELKTSQ  NGEVKLVQSP  IQELETLRGK  EKSYPSQVIK360
PNTNFLANAK  GDTVELVADF  KVDEMTTSKA  FGFRVRKGDD  QATSIGYNNE  KKTIYLDRSF420
SGESYFNDQF  AKVHEAPLEP  VDGHVKMRIL  VDRSSVELFG  NDGQVSITDQ  IFPKGSSDGI480
ELFSSDGDVT  LESLHVYPLN  RIWGNSLFHS  NLSGWEALNG  RWADTISGTQ  GSDTVDSFKL540
ADSRGKDFTY  ETDVKIGNQG  AGGLVFRSDK  TAKNAYVATI  DQPGQMVKLW  KKVDGEASIL600
ATYPAKIDPE  TTNHLKVTTE  GKEIKVHFND  QLAIRTKDNS  LSSGYFGLNV  WNGTSTFQNV660
NTYPKK666

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help