CAZyme3D

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Entry ID

Information for CAZyme ID: ALC31451.1

Basic Information

GenBank IDALC31451.1
FamilyCBM32, GH55
Sequence Length730
UniProt IDA0A0M4DVC0(100,100)Download
Average pLDDT?93.36
CAZy50 ID21571
CAZy50 RepNo, QNA76655.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1649184
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. CFMR 7

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSVALVRPSR  PPMAVLHRWR  ALGFALVTAL  VAALLGVAQA  GPAQAAPVLL  SQGSPVTASS60
EENGGTAARN  AVDGDGGTRW  SSAFSDPQWL  RIDLGSPAAL  SRVELAWEAA  YAKSYRIELS120
TDGSTWRNAY  STTTGQGGNE  TLTVSGEARY  VRLTGTERAT  GYGYSLWEFK  VFGTRDGGGG180
PEIPGGGDLG  PNVHVFDPST  PDIQGKVDAI  FRQQESDQFG  LGRHALLFKP  GTYNNLNAQI240
GFYTQIAGLG  LHPNDTTFNG  DVTVDAGWFN  GNATQNFWRA  AENLTLNPVN  GTNRWAVSQA300
APFRRMHVKG  GLNLAPDGYG  WASGGYIADS  KIDGTVGPYS  QQQWYTRDSS  VGGWTNAVWN360
MTFSGVQGAP  ATSYPNPPYT  TLDTTPISRE  KPFLYLDGND  YKVFVPEKRV  NARGVSWDGG420
SQRGESIPLD  RFYVVKQGAT  AATINAALAQ  GLNLLLTPGV  YHLDRTIEVN  RANTVVLGLG480
LATIIPDNGV  TAMKVADVDG  VKLAGFLIDA  GPVNSPTLLE  VGPQGASADH  AANPTTVQDV540
FIRIGGAGPG  KATTSLVVNS  DDVIIDHTWV  WRADHGEGWG  WETNRADYGV  RVNGDDVLAT600
GLFVEHFNKY  DVEWYGERGR  TIFFQNEKAY  DAPNQAAIQN  GNTKGYAAYR  VDDSVEQHEG660
WGLGSYCYYN  VDPTIIQEHG  FKAPVKPGVK  FHNLLVVSLG  GHGQYQHVIN  NIGAPTSGTS720
TIPSTVVNFP  730

Predicted 3D structure by AlphaFold2 with pLDDT = 93.36 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM32(57-170)+GH55(415-704)

MSVALVRPSR  PPMAVLHRWR  ALGFALVTAL  VAALLGVAQA  GPAQAAPVLL  SQGSPVTASS60
EENGGTAARN  AVDGDGGTRW  SSAFSDPQWL  RIDLGSPAAL  SRVELAWEAA  YAKSYRIELS120
TDGSTWRNAY  STTTGQGGNE  TLTVSGEARY  VRLTGTERAT  GYGYSLWEFK  VFGTRDGGGG180
PEIPGGGDLG  PNVHVFDPST  PDIQGKVDAI  FRQQESDQFG  LGRHALLFKP  GTYNNLNAQI240
GFYTQIAGLG  LHPNDTTFNG  DVTVDAGWFN  GNATQNFWRA  AENLTLNPVN  GTNRWAVSQA300
APFRRMHVKG  GLNLAPDGYG  WASGGYIADS  KIDGTVGPYS  QQQWYTRDSS  VGGWTNAVWN360
MTFSGVQGAP  ATSYPNPPYT  TLDTTPISRE  KPFLYLDGND  YKVFVPEKRV  NARGVSWDGG420
SQRGESIPLD  RFYVVKQGAT  AATINAALAQ  GLNLLLTPGV  YHLDRTIEVN  RANTVVLGLG480
LATIIPDNGV  TAMKVADVDG  VKLAGFLIDA  GPVNSPTLLE  VGPQGASADH  AANPTTVQDV540
FIRIGGAGPG  KATTSLVVNS  DDVIIDHTWV  WRADHGEGWG  WETNRADYGV  RVNGDDVLAT600
GLFVEHFNKY  DVEWYGERGR  TIFFQNEKAY  DAPNQAAIQN  GNTKGYAAYR  VDDSVEQHEG660
WGLGSYCYYN  VDPTIIQEHG  FKAPVKPGVK  FHNLLVVSLG  GHGQYQHVIN  NIGAPTSGTS720
TIPSTVVNFP  730

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help