CAZyme3D

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Entry ID

Information for CAZyme ID: ALC20747.1

Basic Information

GenBank IDALC20747.1
FamilyGT35
Sequence Length913
UniProt IDA0A0M4DE52(100,100)Download
Average pLDDT?88.33
CAZy50 ID4346
CAZy50 RepNo, CAM05389.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID38300
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces pristinaespiralis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTEKDAPSCV  RSDVYLPCEG  ELVKAIRRFT  VRPVLPEPLG  PLSDLARNLR  WSWHTETREL60
FRTVDPEGWR  AVGGDPVRLL  GNVSATRMAE  LAKDRRFLRR  LAAAADDLDD  YLHGRRWYQS120
NGGDGGPDAP  AFPTAIAYFS  PEFGVTAALP  QYSGGLGILA  GDHLKAASDL  GVPLIGVGLL180
YRHGYFRQSL  SRDGWQQEHY  PVLDPNELPV  SLLREVDGTP  ARVSLALPGG  RSLHAHIWVA240
QVGRVPLLML  DSDIEENGPG  ARDVTDRLYG  GGSEHRLLQE  MLLGIGGVRA  VRAYCRLTDR300
PAPEVFHTNE  GHAGFLGLER  IRELGEAPEH  GGSGLGFDAA  LEAVRAGTVF  TTHTPVPAGI360
DRFDRELVAR  HFSEGAELPG  VPVDKVLQLG  METYPGGDPG  VFNMAVMGLR  LAQRANGVSE420
LHGAVSRSMF  AGLWPGFDAA  EVPITSITNG  VHAPTWVAPE  VFRLGARQIG  TSRAEDALSV480
GGSGRWDSVG  NIPDADIWEL  RRSLREQLVM  EVRERLRASW  RQRGAGAAEL  GWIDGVLDPD540
VLTIGFARRV  PSYKRLTLML  RDRERLTELL  LHPTQPIQIV  VAGKAHPADD  GGKRLVRELV600
RFADDPRVRH  RIVFLPDYGM  AMAKKLYPGC  DVWLNNPLRP  LEACGTSGMK  AALNGALNLS660
VLDGWWDEWF  EPDFGWAIPT  ADGASTDEDR  RDELEAAALY  SLIEDRVAPR  FYDRGPGGLP720
DRWIEMVRRT  LTTLGPKVLA  GRMVREYVER  LYAPAARAHR  ALDATSAQDL  AAWKARVRSA780
WRQVAVDHVE  AVDQDAAAGQ  VASAGLGSTL  TLRVQAALGE  LQPDDVEVQV  VAGRVDSDDA840
IRDAQTFPLK  PAGGPDLEGR  WVYEGPLALD  RTGPFGYTVR  ILPAHRLLPA  GSDLGLVAVP900
TETTGEDAGV  LMR913

Predicted 3D structure by AlphaFold2 with pLDDT = 88.33 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(276-672)

MTEKDAPSCV  RSDVYLPCEG  ELVKAIRRFT  VRPVLPEPLG  PLSDLARNLR  WSWHTETREL60
FRTVDPEGWR  AVGGDPVRLL  GNVSATRMAE  LAKDRRFLRR  LAAAADDLDD  YLHGRRWYQS120
NGGDGGPDAP  AFPTAIAYFS  PEFGVTAALP  QYSGGLGILA  GDHLKAASDL  GVPLIGVGLL180
YRHGYFRQSL  SRDGWQQEHY  PVLDPNELPV  SLLREVDGTP  ARVSLALPGG  RSLHAHIWVA240
QVGRVPLLML  DSDIEENGPG  ARDVTDRLYG  GGSEHRLLQE  MLLGIGGVRA  VRAYCRLTDR300
PAPEVFHTNE  GHAGFLGLER  IRELGEAPEH  GGSGLGFDAA  LEAVRAGTVF  TTHTPVPAGI360
DRFDRELVAR  HFSEGAELPG  VPVDKVLQLG  METYPGGDPG  VFNMAVMGLR  LAQRANGVSE420
LHGAVSRSMF  AGLWPGFDAA  EVPITSITNG  VHAPTWVAPE  VFRLGARQIG  TSRAEDALSV480
GGSGRWDSVG  NIPDADIWEL  RRSLREQLVM  EVRERLRASW  RQRGAGAAEL  GWIDGVLDPD540
VLTIGFARRV  PSYKRLTLML  RDRERLTELL  LHPTQPIQIV  VAGKAHPADD  GGKRLVRELV600
RFADDPRVRH  RIVFLPDYGM  AMAKKLYPGC  DVWLNNPLRP  LEACGTSGMK  AALNGALNLS660
VLDGWWDEWF  EPDFGWAIPT  ADGASTDEDR  RDELEAAALY  SLIEDRVAPR  FYDRGPGGLP720
DRWIEMVRRT  LTTLGPKVLA  GRMVREYVER  LYAPAARAHR  ALDATSAQDL  AAWKARVRSA780
WRQVAVDHVE  AVDQDAAAGQ  VASAGLGSTL  TLRVQAALGE  LQPDDVEVQV  VAGRVDSDDA840
IRDAQTFPLK  PAGGPDLEGR  WVYEGPLALD  RTGPFGYTVR  ILPAHRLLPA  GSDLGLVAVP900
TETTGEDAGV  LMR913

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help