Information for CAZyme ID: ALC20747.1
Basic Information
GenBank ID | ALC20747.1 |
Family | GT35 |
Sequence Length | 913 |
UniProt ID | A0A0M4DE52(100,100)![]() |
Average pLDDT? | 88.33 |
CAZy50 ID | 4346 |
CAZy50 Rep | No, CAM05389.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 38300 |
Kingdom | Bacteria |
Phylum | Actinomycetota |
Class | Actinomycetes |
Order | Kitasatosporales |
Family | Streptomycetaceae |
Genus | Streptomyces |
Species | Streptomyces pristinaespiralis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTEKDAPSCV RSDVYLPCEG ELVKAIRRFT VRPVLPEPLG PLSDLARNLR WSWHTETREL | 60 |
FRTVDPEGWR AVGGDPVRLL GNVSATRMAE LAKDRRFLRR LAAAADDLDD YLHGRRWYQS | 120 |
NGGDGGPDAP AFPTAIAYFS PEFGVTAALP QYSGGLGILA GDHLKAASDL GVPLIGVGLL | 180 |
YRHGYFRQSL SRDGWQQEHY PVLDPNELPV SLLREVDGTP ARVSLALPGG RSLHAHIWVA | 240 |
QVGRVPLLML DSDIEENGPG ARDVTDRLYG GGSEHRLLQE MLLGIGGVRA VRAYCRLTDR | 300 |
PAPEVFHTNE GHAGFLGLER IRELGEAPEH GGSGLGFDAA LEAVRAGTVF TTHTPVPAGI | 360 |
DRFDRELVAR HFSEGAELPG VPVDKVLQLG METYPGGDPG VFNMAVMGLR LAQRANGVSE | 420 |
LHGAVSRSMF AGLWPGFDAA EVPITSITNG VHAPTWVAPE VFRLGARQIG TSRAEDALSV | 480 |
GGSGRWDSVG NIPDADIWEL RRSLREQLVM EVRERLRASW RQRGAGAAEL GWIDGVLDPD | 540 |
VLTIGFARRV PSYKRLTLML RDRERLTELL LHPTQPIQIV VAGKAHPADD GGKRLVRELV | 600 |
RFADDPRVRH RIVFLPDYGM AMAKKLYPGC DVWLNNPLRP LEACGTSGMK AALNGALNLS | 660 |
VLDGWWDEWF EPDFGWAIPT ADGASTDEDR RDELEAAALY SLIEDRVAPR FYDRGPGGLP | 720 |
DRWIEMVRRT LTTLGPKVLA GRMVREYVER LYAPAARAHR ALDATSAQDL AAWKARVRSA | 780 |
WRQVAVDHVE AVDQDAAAGQ VASAGLGSTL TLRVQAALGE LQPDDVEVQV VAGRVDSDDA | 840 |
IRDAQTFPLK PAGGPDLEGR WVYEGPLALD RTGPFGYTVR ILPAHRLLPA GSDLGLVAVP | 900 |
TETTGEDAGV LMR | 913 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.33 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GT35(276-672)
MTEKDAPSCV RSDVYLPCEG ELVKAIRRFT VRPVLPEPLG PLSDLARNLR WSWHTETREL | 60 |
FRTVDPEGWR AVGGDPVRLL GNVSATRMAE LAKDRRFLRR LAAAADDLDD YLHGRRWYQS | 120 |
NGGDGGPDAP AFPTAIAYFS PEFGVTAALP QYSGGLGILA GDHLKAASDL GVPLIGVGLL | 180 |
YRHGYFRQSL SRDGWQQEHY PVLDPNELPV SLLREVDGTP ARVSLALPGG RSLHAHIWVA | 240 |
QVGRVPLLML DSDIEENGPG ARDVTDRLYG GGSEHRLLQE MLLGIGGVRA VRAYCRLTDR | 300 |
PAPEVFHTNE GHAGFLGLER IRELGEAPEH GGSGLGFDAA LEAVRAGTVF TTHTPVPAGI | 360 |
DRFDRELVAR HFSEGAELPG VPVDKVLQLG METYPGGDPG VFNMAVMGLR LAQRANGVSE | 420 |
LHGAVSRSMF AGLWPGFDAA EVPITSITNG VHAPTWVAPE VFRLGARQIG TSRAEDALSV | 480 |
GGSGRWDSVG NIPDADIWEL RRSLREQLVM EVRERLRASW RQRGAGAAEL GWIDGVLDPD | 540 |
VLTIGFARRV PSYKRLTLML RDRERLTELL LHPTQPIQIV VAGKAHPADD GGKRLVRELV | 600 |
RFADDPRVRH RIVFLPDYGM AMAKKLYPGC DVWLNNPLRP LEACGTSGMK AALNGALNLS | 660 |
VLDGWWDEWF EPDFGWAIPT ADGASTDEDR RDELEAAALY SLIEDRVAPR FYDRGPGGLP | 720 |
DRWIEMVRRT LTTLGPKVLA GRMVREYVER LYAPAARAHR ALDATSAQDL AAWKARVRSA | 780 |
WRQVAVDHVE AVDQDAAAGQ VASAGLGSTL TLRVQAALGE LQPDDVEVQV VAGRVDSDDA | 840 |
IRDAQTFPLK PAGGPDLEGR WVYEGPLALD RTGPFGYTVR ILPAHRLLPA GSDLGLVAVP | 900 |
TETTGEDAGV LMR | 913 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.