CAZyme3D

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Entry ID

Information for CAZyme ID: ALC20638.1

Basic Information

GenBank IDALC20638.1
FamilyCBM11, GH3
Sequence Length1029
UniProt IDA0A0M4DA49(100,100)Download
Average pLDDT?91.20
CAZy50 ID2419
CAZy50 RepNo, VEH27113.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID38300
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces pristinaespiralis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MPGSRRPRPR  PGPRRAGTAL  LAATAVLGSL  IAGALPSAAA  DEPAPVPVDR  FEGEVPFANP60
PAEGIFTWGS  DADDQPKLEF  KERADAPEGS  KVLQGSYDIS  GWGGLSHEYA  VDQAPRDWTA120
SKGIRFWWYG  QNTAPLPPGS  GKRINFEIKD  GGANGGASEL  WTTSFTDDWE  GWHLVEIPFS180
DFVYRADYQP  VGGIDQVLGL  NEMWGWALTL  PTGAPGTFAV  DGMELYGKAD  PALKAKVLTD240
AAVYPVDEGG  TAQVKISVAT  TGSVPTEEPV  TVEYRTGGGS  AEAGADYEPV  TGSVTFPAGT300
ASGESRTVAV  RTDKDGSAES  AETVPLQLTV  TGAKAPAETP  QVVVNAHGLP  YQNARLPVKK360
RVADLLSRMS  LAEKAGQMTQ  AERNALKSQG  DIASYDLGSL  LSGGGSVPTP  NTPEAWAKMV420
DTYQLRAQAT  RYQIPLIYGV  DAVHGHNNVI  GSTIMPHNIG  IGAGRDPRIA  ERTGAVTAKE480
VRATGIPWDF  APCLCVTRDE  RWGRSYEAFG  EDPALVTAME  TVIQGMQGAR  NGKDLDRSDK540
VLTSAKHFVG  DGGTGFGSSS  TGSYTIDQGI  TKVTREELEA  VHLAPFAEAV  KRGAGTVMPS600
YSSLDIIGDD  AGPVKMHAHA  EMINGVLKDR  MGFDGFVISD  WQAIDQIPGD  YPSDVRTSVN660
AGLDMIMVPT  NYQEFTRTLK  DEVTAGRISE  ARVDDAVSRI  LTQKFKLGLF  EKPYADTGNL720
DEVGSAEHRA  VAREAVAKSQ  VLLKNDGAVL  PLKKSQKVYV  AGSNADDLGN  QAGGWTISWQ780
GSSGEITTGT  TILEGMKRAA  PDATIDYSKD  ASAATDGYDV  GVVVVGETPY  AEGIGDVGNG840
HDLELTAADK  AAVDKVCAAM  KCAVLVVSGR  PQLIGDRLEG  IDALVASWLP  GTEGDGVADV900
LYGTRPFTGQ  LPVTWPKSEA  QLPINVGDAA  YDPLFPYGWG  LTTSGRTPAG  GELTLRAVAV960
AAKVLQATGR  GRSEQARELV  GTARLIVQQK  IGGHITEASA  KPFAEADHLL  LTGDPAGAVA1020
KLTAAYRAG1029

Predicted 3D structure by AlphaFold2 with pLDDT = 91.20 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : CBM11(63-227)+GH3(427-668)

MPGSRRPRPR  PGPRRAGTAL  LAATAVLGSL  IAGALPSAAA  DEPAPVPVDR  FEGEVPFANP60
PAEGIFTWGS  DADDQPKLEF  KERADAPEGS  KVLQGSYDIS  GWGGLSHEYA  VDQAPRDWTA120
SKGIRFWWYG  QNTAPLPPGS  GKRINFEIKD  GGANGGASEL  WTTSFTDDWE  GWHLVEIPFS180
DFVYRADYQP  VGGIDQVLGL  NEMWGWALTL  PTGAPGTFAV  DGMELYGKAD  PALKAKVLTD240
AAVYPVDEGG  TAQVKISVAT  TGSVPTEEPV  TVEYRTGGGS  AEAGADYEPV  TGSVTFPAGT300
ASGESRTVAV  RTDKDGSAES  AETVPLQLTV  TGAKAPAETP  QVVVNAHGLP  YQNARLPVKK360
RVADLLSRMS  LAEKAGQMTQ  AERNALKSQG  DIASYDLGSL  LSGGGSVPTP  NTPEAWAKMV420
DTYQLRAQAT  RYQIPLIYGV  DAVHGHNNVI  GSTIMPHNIG  IGAGRDPRIA  ERTGAVTAKE480
VRATGIPWDF  APCLCVTRDE  RWGRSYEAFG  EDPALVTAME  TVIQGMQGAR  NGKDLDRSDK540
VLTSAKHFVG  DGGTGFGSSS  TGSYTIDQGI  TKVTREELEA  VHLAPFAEAV  KRGAGTVMPS600
YSSLDIIGDD  AGPVKMHAHA  EMINGVLKDR  MGFDGFVISD  WQAIDQIPGD  YPSDVRTSVN660
AGLDMIMVPT  NYQEFTRTLK  DEVTAGRISE  ARVDDAVSRI  LTQKFKLGLF  EKPYADTGNL720
DEVGSAEHRA  VAREAVAKSQ  VLLKNDGAVL  PLKKSQKVYV  AGSNADDLGN  QAGGWTISWQ780
GSSGEITTGT  TILEGMKRAA  PDATIDYSKD  ASAATDGYDV  GVVVVGETPY  AEGIGDVGNG840
HDLELTAADK  AAVDKVCAAM  KCAVLVVSGR  PQLIGDRLEG  IDALVASWLP  GTEGDGVADV900
LYGTRPFTGQ  LPVTWPKSEA  QLPINVGDAA  YDPLFPYGWG  LTTSGRTPAG  GELTLRAVAV960
AAKVLQATGR  GRSEQARELV  GTARLIVQQK  IGGHITEASA  KPFAEADHLL  LTGDPAGAVA1020
KLTAAYRAG1029

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help