Information for CAZyme ID: ALA59236.1
Basic Information
GenBank ID | ALA59236.1 |
Family | GH2 |
Sequence Length | 611 |
UniProt ID | A0A0K2GE56(100,100)![]() |
Average pLDDT? | 90.97 |
CAZy50 ID | 45843 |
CAZy50 Rep | No, QYO62738.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 42253 |
Kingdom | Bacteria |
Phylum | Nitrospirota |
Class | Nitrospiria |
Order | Nitrospirales |
Family | Nitrospiraceae |
Genus | Nitrospira |
Species | Nitrospira moscoviensis |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MTREEDCEEG RIGYPRPELR RTDWLCLNGE WDFSIDPYGV WEHPSEVVWR RTIAVPFAPE | 60 |
TPASGIEEQG FFRACWYRRS IAPPKLRPGE RWMLHFGAVD YLATVWLGGR CLGSHEGGYT | 120 |
PFSFDVTDLL QGPGRGTESR DLVVRAVDLP DDLQQPRGKQ DWQREPHLIW YPRTTGIWQT | 180 |
VWLERLPATY IADVRYTPNL SRWEIGLYVG TAGREAEGAK IRATLKVGGR LLAEDVYSVS | 240 |
IGEVHRRIAL SDPGIDDSRN QLLWSPGSPT LIDVRLELLS KHGDVIDTVD SYAALREVAI | 300 |
QGDRVTLNGR AVQLRMVLDQ GYWPDTGMTP PDDAALRRDV ELAKLMGFNG VRKHQKIEDP | 360 |
RYLYWADRLG LLVWEEMPSA YRFTRKSVER VKLQWEEILR RDYNHPCIMA WVPFNESWGV | 420 |
PNLPDNEPER HYVQALYHLT KTLDPTRPVV GNDGWESVAT DIIGIHDYDD DPHRMARRYE | 480 |
TTDMRVRLFQ HERPGGRILL LQGGSPHADH PIVLSEFGGI AIQGDERTWG YSRSETADDL | 540 |
ERRYVDLLHV VHDLQLLAGF CYTQFADTYQ EANGLLYADR RPKFPIERIA EATRGRQWRA | 600 |
AQELTPGGPA A | 611 |
Predicted 3D structure by AlphaFold2 with pLDDT = 90.97 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH2(20-516)
MTREEDCEEG RIGYPRPELR RTDWLCLNGE WDFSIDPYGV WEHPSEVVWR RTIAVPFAPE | 60 |
TPASGIEEQG FFRACWYRRS IAPPKLRPGE RWMLHFGAVD YLATVWLGGR CLGSHEGGYT | 120 |
PFSFDVTDLL QGPGRGTESR DLVVRAVDLP DDLQQPRGKQ DWQREPHLIW YPRTTGIWQT | 180 |
VWLERLPATY IADVRYTPNL SRWEIGLYVG TAGREAEGAK IRATLKVGGR LLAEDVYSVS | 240 |
IGEVHRRIAL SDPGIDDSRN QLLWSPGSPT LIDVRLELLS KHGDVIDTVD SYAALREVAI | 300 |
QGDRVTLNGR AVQLRMVLDQ GYWPDTGMTP PDDAALRRDV ELAKLMGFNG VRKHQKIEDP | 360 |
RYLYWADRLG LLVWEEMPSA YRFTRKSVER VKLQWEEILR RDYNHPCIMA WVPFNESWGV | 420 |
PNLPDNEPER HYVQALYHLT KTLDPTRPVV GNDGWESVAT DIIGIHDYDD DPHRMARRYE | 480 |
TTDMRVRLFQ HERPGGRILL LQGGSPHADH PIVLSEFGGI AIQGDERTWG YSRSETADDL | 540 |
ERRYVDLLHV VHDLQLLAGF CYTQFADTYQ EANGLLYADR RPKFPIERIA EATRGRQWRA | 600 |
AQELTPGGPA A | 611 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.