CAZyme3D

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Entry ID

Information for CAZyme ID: ALA58907.1

Basic Information

GenBank IDALA58907.1
FamilyGT20
Sequence Length749
UniProt IDA0A0K2GE99(100,100)Download
Average pLDDT?85.66
CAZy50 ID27464
CAZy50 RepNo, UFU11746.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID42253
KingdomBacteria
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesNitrospira moscoviensis
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A0K2GE99.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MRLSLRFILP  LALVLAGLAY  AVIPLVDTLT  LKWFVRDLEI  RSRLIANTIE  GPLADLLSTE60
SKAKLVQYFH  RLTQDERLFA  IGFCDRDNKL  LYKTQTYPDS  IPCSGTATVK  PDRTTVLQLP120
QGAVHVSAVE  MQADGRALGR  LMLVHDMSWV  QRRSSDTKWY  LFYLFAVIGA  VISLVTVMVA180
HLSWKGWVSG  VQSMLRGEGL  LSLLGNHRHA  PELQPVAKDL  RALIHQLESE  KRLRDESQMT240
WTPLALKRIL  HDYLAGDEII  ILSNREPYIH  NWKEDRVEVQ  VPASGLVTAL  EPIMRACSGV300
WIAHGSGSAD  RDTVDARGHV  RVPPERPAYA  IRRIWMKAEE  ETGYYYGFAN  EGLWPLCHLA360
HVRPVFRSQD  WRHYKEINER  FAMAVIEEAK  TDNPVVLVQD  YHLALAPKII  RDHLANATII420
TFWHIPWPNS  ERYAICPWHR  EILEGLLGSS  ILGFHTRFHC  SNFIDSVDRL  LESRIDRDTS480
TISHGGKLTA  VHHYPISIEW  PSGPLRAHPS  VPDCRTQIRT  LHRLKPEHRI  ALGVERLDYT540
KGILERFLAV  ERLLELQPEW  IGRFTFIQIA  APSRSIIEQY  RRFSEEVRAL  ADRINARFGY600
TGYQPIVLLV  EHHSPADLMT  YYRGADCCFV  SSLHDGMNLV  AKEFVAARDD  DQGVLILSQF660
TGAACELPEA  LIVNPYHIDQ  CAAALHLALT  MPAVEQRARM  RSMRGVVQEF  NVYRWAGRML720
MDAARMRQRA  RLIREVGEPD  MRVITGGSA749

Predicted 3D structure by AlphaFold2 with pLDDT = 85.66 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT20(257-723)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help