CAZyme3D

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Entry ID

Information for CAZyme ID: AKU96613.1

Basic Information

GenBank IDAKU96613.1
FamilyGT4
Sequence Length481
UniProt IDA0A0K1PSV2(100,100)Download
Average pLDDT?92.37
CAZy50 ID58508
CAZy50 RepNo, QBR91791.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1391654
KingdomBacteria
PhylumMyxococcota
Class
OrderPolyangiales
FamilyLabilitrichaceae
GenusLabilithrix
SpeciesLabilithrix luteola
PDB file does not exist: ../CAZyme3D/mapped_uniprot_cazy/A0A0K1PSV2.pdb

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MFEVNVTARS  AEPFAELLGP  ERVVALQRVS  EEIRGLLGAH  AVFNVSSTAT  GGGVAEMLRS60
LLRYARGLGI  LARWAVIEGP  PEFFRITKRL  HNAMHGCAGD  GSPLGAAEAA  LYEQVTKQNA120
VALDALIRPE  DVVVCHDPQT  AGLIPHFVCK  GMRVVWRCHI  GHDQVDPEVE  LAWNFLRKYV180
EQAPYSVFSR  QSYAPSWLHH  KQTIVLPPNI  DPFSAKNQFM  DEATTRAILF  DVGLVGGPRG240
DAPAVFSRED  GSVGRVDRQA  EVVRVGPAPS  WKTPLVVQVS  RWDTMKDPLG  VLRGFTECLA300
PDIPRDAALV  LAGPGVRTVA  DDPEAPQVLR  SVETYWRQLP  DSLRRTAHLV  QLPMEDTEEN360
AAIVNALQRH  ATVVVQKSLR  EGFGLTVTEA  MWKRRPVIAS  AVGGIQDQIQ  DGVDGLLLRN420
PEDPREFANA  LRRVLSDEAL  AERLGRAGFE  RVRDEYLGIT  SLENWAAVVR  LLFSGTAAAQ480
P481

Predicted 3D structure by AlphaFold2 with pLDDT = 92.37 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT4(272-445)

0

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help