CAZyme3D

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Entry ID

Information for CAZyme ID: AKU17312.1

Basic Information

GenBank IDAKU17312.1
FamilyGH163
Sequence Length754
UniProt IDA0A0K1JKS5(100,100)Download
Average pLDDT?89.44
CAZy50 ID30314
CAZy50 RepNo, SDS61087.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID571913
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermacoccaceae
GenusLuteipulveratus
SpeciesLuteipulveratus mongoliensis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MMTSTDSFSS  NNASGVTRRR  FLSGATGLAV  TAAGATLEPQ  TAAAAVSPAR  RPIRLARKGR60
TAYRIYHGAA  EGLVVRQAAE  ELASYLHGIT  SATFDIVSAD  EPPADTSTLL  VVGRANPLTT120
ATRIDFTGLG  EDGFALRTTG  STVFIAGAHP  RGTLYGAYWV  LDRLLGVRWF  AADATTIPHA180
VTLDVASDKL  NGDHVPRFRY  RQILAGSGSD  PAYRQHNLLN  GARGWDDGQI  DAPPAPASIN240
TWSPYWPADP  FGGNFHVMVP  DQSLWAGGQL  QCMAPKTRSM  AADSLIKTLK  ERMARGEDPS300
FGFEQQDAGW  TPDAASRAFA  DQHGGALSAP  VLDLVNDVVS  RVRKQVPQAR  LSTQAYLFSF360
PPPTGIAPAD  GVVMTIAPIE  ANFAESHFTG  SNQKSGGHIR  DWCGIAKDVV  LWDYVTNFSC420
YIQPFPDWWT  VADSIRGLAR  YPAAQGYLGQ  SAWDARGSEF  VNLRVWVLSR  LLWEPHLDVD480
PLIREFLKGY  YGPASSLIYL  YMRLMRESVN  RSKSGLTLYD  SVKAEFLNFD  TMRHADVLMA540
RASDTVRRHP  DFAKRVQALR  LGVDYVVLMR  SNEYLRIAAE  RGIDWDPDRD  NRLERFKAEI600
SAAGLTRYRE  GRGTPEELLT  LVTNMSAPAD  PSIINDDSSQ  ITYTGAWQVS  AGRSLGDHND660
DVHYTLTTGD  SATITFTGTG  IDYYAPKHDD  TSSAQVTLDG  VDKGEYAARS  SDGTYQPRTV720
IYGVRNLPAG  QHTLAVANVG  NAAFFTVDGF  KIIT754

Predicted 3D structure by AlphaFold2 with pLDDT = 89.44 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH163(268-502)

MMTSTDSFSS  NNASGVTRRR  FLSGATGLAV  TAAGATLEPQ  TAAAAVSPAR  RPIRLARKGR60
TAYRIYHGAA  EGLVVRQAAE  ELASYLHGIT  SATFDIVSAD  EPPADTSTLL  VVGRANPLTT120
ATRIDFTGLG  EDGFALRTTG  STVFIAGAHP  RGTLYGAYWV  LDRLLGVRWF  AADATTIPHA180
VTLDVASDKL  NGDHVPRFRY  RQILAGSGSD  PAYRQHNLLN  GARGWDDGQI  DAPPAPASIN240
TWSPYWPADP  FGGNFHVMVP  DQSLWAGGQL  QCMAPKTRSM  AADSLIKTLK  ERMARGEDPS300
FGFEQQDAGW  TPDAASRAFA  DQHGGALSAP  VLDLVNDVVS  RVRKQVPQAR  LSTQAYLFSF360
PPPTGIAPAD  GVVMTIAPIE  ANFAESHFTG  SNQKSGGHIR  DWCGIAKDVV  LWDYVTNFSC420
YIQPFPDWWT  VADSIRGLAR  YPAAQGYLGQ  SAWDARGSEF  VNLRVWVLSR  LLWEPHLDVD480
PLIREFLKGY  YGPASSLIYL  YMRLMRESVN  RSKSGLTLYD  SVKAEFLNFD  TMRHADVLMA540
RASDTVRRHP  DFAKRVQALR  LGVDYVVLMR  SNEYLRIAAE  RGIDWDPDRD  NRLERFKAEI600
SAAGLTRYRE  GRGTPEELLT  LVTNMSAPAD  PSIINDDSSQ  ITYTGAWQVS  AGRSLGDHND660
DVHYTLTTGD  SATITFTGTG  IDYYAPKHDD  TSSAQVTLDG  VDKGEYAARS  SDGTYQPRTV720
IYGVRNLPAG  QHTLAVANVG  NAAFFTVDGF  KIIT754

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help