CAZyme3D

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Entry ID

Information for CAZyme ID: AKL70477.1

Basic Information

GenBank IDAKL70477.1
FamilyGT2
Sequence Length238
UniProt IDA0A0G3UVJ1(100,100)Download
Average pLDDT?87.62
CAZy50 ID37172
CAZy50 RepNo, QKW23993.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID465541
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces sp. Mg1

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTESACAPPR  ADLVLPCLDE  AEALPWVLAR  VPAGWRAIVV  DNGSTDGSAD  IARGLGATVV60
HESRRGFGAA  CHAGLLAARA  DLVCFCDCDA  SLDPGLLAPM  AARVAAGEAD  LLLGRRRPRG120
RGAWPAHARA  GNLALARMLR  SRTGLRLHDL  GPMRVARREA  LVGLELTDRR  SGYPLQMVVR180
AADAGWRVAE  TDVPYLPRSG  KSKVTGTWRG  TWHAVRDMRR  VLAEPPLKRS  APSAGVRT238

Predicted 3D structure by AlphaFold2 with pLDDT = 87.62 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(13-161)

MTESACAPPR  ADLVLPCLDE  AEALPWVLAR  VPAGWRAIVV  DNGSTDGSAD  IARGLGATVV60
HESRRGFGAA  CHAGLLAARA  DLVCFCDCDA  SLDPGLLAPM  AARVAAGEAD  LLLGRRRPRG120
RGAWPAHARA  GNLALARMLR  SRTGLRLHDL  GPMRVARREA  LVGLELTDRR  SGYPLQMVVR180
AADAGWRVAE  TDVPYLPRSG  KSKVTGTWRG  TWHAVRDMRR  VLAEPPLKRS  APSAGVRT238

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help