CAZyme3D

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Entry ID

Information for CAZyme ID: AKJ10697.1

Basic Information

GenBank IDAKJ10697.1
FamilyGT35
Sequence Length872
UniProt IDA0A0G3AEF7(100,100)Download
Average pLDDT?91.21
CAZy50 ID4346
CAZy50 RepNo, CAM05389.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID665007
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces incarnatus

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKAIRRFTVR  PVLPEPLRPL  SDLARNLRWS  WHAETRDLFQ  SVDPEAWAAA  GGDPVRTLGR60
VRPARLAELA  GDRRFLRRLT  AVADDLDDYL  TGDRWYQTQA  AGMPAAIAYF  SPEFGITAAL120
PQYSGGLGIL  AGDHLKAASD  LGVPLIGVGL  LYRHGYFRQT  LSRDGWQQEH  YPVLDPNELP180
LTQLKEADGA  LARISLALPG  GRALHARIWL  AQVGRVPLLL  LDSDVEENDL  GERGVTDRLY240
GGGSEHRLLQ  EMLLGIGGVR  AVRTYCRLTG  HPHPEVFHTN  EGHAGFLGLE  RIAELCAAGL300
DFDSSLEAVR  GGTVFTTHTP  VPAGIDRFDR  ELVARHFGAD  AELPGIDVQR  ILTLGMETYP360
GGEPNLFNMA  VMGLRLAQRA  NGVSLLHGHV  SREMFAGLWP  GFDPDEVPIT  SVTNGVHAPT420
WVAPEVLRLG  ARQVGSERAE  DALTVGGSER  WDSVAEIEDQ  DIWELRRTLR  EQLVLEVRER480
LRTSWRQRGA  GDAELGWIDG  VLDPDVLTIG  FARRVPSYKR  LTLMLRDRDR  LMELLLHPEH540
PIQIVVAGKA  HPADDSGKRL  VQELVRFADD  PRVRHRIVFL  PDYGMAMAQK  LYPGCDIWLN600
NPLRPLEACG  TSGMKAALNG  CLNLSVLDGW  WDEWFQPDFG  WAIPTADGAG  TDPDRRDDIE660
AAALYDLLEQ  RVTPRFYERG  RGGLPDRWIA  MVRQTLSLLG  PKVLAGRMVR  EYVDRLYVPA720
AHAHRALTPD  TASDLAAWKA  RVRAAWPGVS  VDHVETTAPT  ATAELGTTVG  LRVRVALGSL780
TPDDVEVQAV  SGRVDAEDRI  TDATVVPLKP  TSAPDLEGRL  LYEGPLALDR  TGPYGYTVRI840
LPSHRLLSSA  AEMGLVAVPT  EEGVEGAGVL  LR872

Predicted 3D structure by AlphaFold2 with pLDDT = 91.21 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(247-636)

MKAIRRFTVR  PVLPEPLRPL  SDLARNLRWS  WHAETRDLFQ  SVDPEAWAAA  GGDPVRTLGR60
VRPARLAELA  GDRRFLRRLT  AVADDLDDYL  TGDRWYQTQA  AGMPAAIAYF  SPEFGITAAL120
PQYSGGLGIL  AGDHLKAASD  LGVPLIGVGL  LYRHGYFRQT  LSRDGWQQEH  YPVLDPNELP180
LTQLKEADGA  LARISLALPG  GRALHARIWL  AQVGRVPLLL  LDSDVEENDL  GERGVTDRLY240
GGGSEHRLLQ  EMLLGIGGVR  AVRTYCRLTG  HPHPEVFHTN  EGHAGFLGLE  RIAELCAAGL300
DFDSSLEAVR  GGTVFTTHTP  VPAGIDRFDR  ELVARHFGAD  AELPGIDVQR  ILTLGMETYP360
GGEPNLFNMA  VMGLRLAQRA  NGVSLLHGHV  SREMFAGLWP  GFDPDEVPIT  SVTNGVHAPT420
WVAPEVLRLG  ARQVGSERAE  DALTVGGSER  WDSVAEIEDQ  DIWELRRTLR  EQLVLEVRER480
LRTSWRQRGA  GDAELGWIDG  VLDPDVLTIG  FARRVPSYKR  LTLMLRDRDR  LMELLLHPEH540
PIQIVVAGKA  HPADDSGKRL  VQELVRFADD  PRVRHRIVFL  PDYGMAMAQK  LYPGCDIWLN600
NPLRPLEACG  TSGMKAALNG  CLNLSVLDGW  WDEWFQPDFG  WAIPTADGAG  TDPDRRDDIE660
AAALYDLLEQ  RVTPRFYERG  RGGLPDRWIA  MVRQTLSLLG  PKVLAGRMVR  EYVDRLYVPA720
AHAHRALTPD  TASDLAAWKA  RVRAAWPGVS  VDHVETTAPT  ATAELGTTVG  LRVRVALGSL780
TPDDVEVQAV  SGRVDAEDRI  TDATVVPLKP  TSAPDLEGRL  LYEGPLALDR  TGPYGYTVRI840
LPSHRLLSSA  AEMGLVAVPT  EEGVEGAGVL  LR872

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help