CAZyme3D

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Entry ID

Information for CAZyme ID: AKC95433.1

Basic Information

GenBank IDAKC95433.1
FamilyGT35
Sequence Length829
UniProt IDA0A0E3UUM7(100,100)Download
Average pLDDT?94.54
CAZy50 ID22084
CAZy50 RepNo, ACR74816.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID187101
KingdomBacteria
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyLeptotrichiaceae
GenusSneathia
SpeciesSneathia vaginalis

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MSSEVNIMQK  ITKEQLKEKI  KLALRRQYGK  TLEEAKNYEI  YYAVSSAVMD  DVVEKWYNTK60
KTYAKKQVKQ  MYYFSAEFLM  GRYLGNNLIN  LQYDKIIKEV  LDDLNIDLSL  IEDKEMDTGL120
GNGGLGRLAA  CFLDSLATLS  LPGHGYGLRY  KYGLFEQKIE  NGFQVEYPDD  WTKFGTPWDI180
KRLDRTFEVK  FGGNVEIHKD  EVGKEYYKRV  NTENVKAIAY  DVPVIGYGNG  VVNTLRLWEA240
QSMEGFDLQL  FNAQRYLAAS  EKEIEAEDIS  RVLYPNDTER  SGKWLRLKQQ  YFFTSASLQD300
IVRRYKSIYG  NNFDKFSDKI  AIQLNDTHPV  VAIPELMRIL  LDYEKLGWDE  AWNICKKVFA360
YTNHTILSEA  LEKWDISLIQ  PLLPRIYQII  EEINRRFVNE  LREKYPSDFD  RINRMSIISN420
GQVKMAWLAI  VASHTVNGVA  TLHTEILKHQ  ELKDWYELYP  DKFQNKTNGI  TQRRWVLKAN480
PELSEYITKL  IGSDKWITNL  SELKKLEKYI  DDEKVLHDIM  EIKLNNKKKL  AKYILDTTGI540
EVDPTSIFDI  QVKRLHEYKR  QLLNVFHIMD  LYNKLKENPL  LDVYPRTFIF  AAKSAPGYRR600
AKGIIKLINS  IAQVINNDAS  INGKIKVVFL  ENYRVSLAER  IFPAADISEQ  ISTAGKEASG660
TGNMKFMVNG  AITLGTMDGA  NIEIVEEAGK  ENEFIFGLTA  DEVERLNEYG  KYDPMEEYYV720
VDGLQKVVDQ  LTDGTYDDNH  TGLFKEIRDS  ILYGVDGNRP  DVYYVLKDFP  QYRATQAKIS780
KAFAQKENWA  KMALKNIANA  GKFSSDRTIE  EYANDIWNIK  PCKPENYIK829

Predicted 3D structure by AlphaFold2 with pLDDT = 94.54 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT35(101-820)

MSSEVNIMQK  ITKEQLKEKI  KLALRRQYGK  TLEEAKNYEI  YYAVSSAVMD  DVVEKWYNTK60
KTYAKKQVKQ  MYYFSAEFLM  GRYLGNNLIN  LQYDKIIKEV  LDDLNIDLSL  IEDKEMDTGL120
GNGGLGRLAA  CFLDSLATLS  LPGHGYGLRY  KYGLFEQKIE  NGFQVEYPDD  WTKFGTPWDI180
KRLDRTFEVK  FGGNVEIHKD  EVGKEYYKRV  NTENVKAIAY  DVPVIGYGNG  VVNTLRLWEA240
QSMEGFDLQL  FNAQRYLAAS  EKEIEAEDIS  RVLYPNDTER  SGKWLRLKQQ  YFFTSASLQD300
IVRRYKSIYG  NNFDKFSDKI  AIQLNDTHPV  VAIPELMRIL  LDYEKLGWDE  AWNICKKVFA360
YTNHTILSEA  LEKWDISLIQ  PLLPRIYQII  EEINRRFVNE  LREKYPSDFD  RINRMSIISN420
GQVKMAWLAI  VASHTVNGVA  TLHTEILKHQ  ELKDWYELYP  DKFQNKTNGI  TQRRWVLKAN480
PELSEYITKL  IGSDKWITNL  SELKKLEKYI  DDEKVLHDIM  EIKLNNKKKL  AKYILDTTGI540
EVDPTSIFDI  QVKRLHEYKR  QLLNVFHIMD  LYNKLKENPL  LDVYPRTFIF  AAKSAPGYRR600
AKGIIKLINS  IAQVINNDAS  INGKIKVVFL  ENYRVSLAER  IFPAADISEQ  ISTAGKEASG660
TGNMKFMVNG  AITLGTMDGA  NIEIVEEAGK  ENEFIFGLTA  DEVERLNEYG  KYDPMEEYYV720
VDGLQKVVDQ  LTDGTYDDNH  TGLFKEIRDS  ILYGVDGNRP  DVYYVLKDFP  QYRATQAKIS780
KAFAQKENWA  KMALKNIANA  GKFSSDRTIE  EYANDIWNIK  PCKPENYIK829

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help