CAZyme3D

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Entry ID

Information for CAZyme ID: AKC38518.1

Basic Information

GenBank IDAKC38518.1
FamilyGH13_30
Sequence Length529
UniProt IDA0A0E3XNY7(100,100)Download
Average pLDDT?94.16
CAZy50 ID33390
CAZy50 RepNo, AZG43962.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1774
KingdomBacteria
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacteroides
SpeciesMycobacteroides chelonae

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MTAAYLGQHD  DPWWSRAVFY  QIYPRSFGDS  DGDGVGDLDG  ISAKLGYLDL  LGIQGIWLNP60
VTKSPMADHG  YDVSNPREID  PLFGGSIAMH  RLIASAHRHN  IKVIMDLVPN  HTSSEHRWFI120
EALAAEPGSE  ARSRYIFRDG  KGVNGELPPN  NWPSVFGGPA  WTRVTEPDGT  PGQWYLHLFA180
PEQPDVNWDN  PEVFDDFAET  LRFWLDRGID  GFRLDVAHGM  AKPPGLPDIE  DTETSMLHIA240
DEDPRFNNEG  VHEYHREIRK  VLDQYRDVVA  VGEIWVNDNT  RFAEYVRPDE  LHLGFNFKLV300
EADFDADKIR  AAIENSLAAV  DSVGATPTWT  LSNHDVEREV  TRYGNGQIGQ  WRARAMALVM360
LALPGTVFIY  NGSELGLPNV  DLPDEALQDP  VWERSGHTER  GRDGCRVPIP  WEGTDPPYGF420
SSNDQTWLPM  PHGWADFTVE  SQLEQADSTL  SLYRRAIELR  KNRKEFNGTS  LEWYGSPPGA480
LAFRVKGGGL  TCALNVSSDL  VDLPAGEVIL  TSGPLVNGKL  PRNTAAWIV529

Predicted 3D structure by AlphaFold2 with pLDDT = 94.16 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GH13_30(36-378)

MTAAYLGQHD  DPWWSRAVFY  QIYPRSFGDS  DGDGVGDLDG  ISAKLGYLDL  LGIQGIWLNP60
VTKSPMADHG  YDVSNPREID  PLFGGSIAMH  RLIASAHRHN  IKVIMDLVPN  HTSSEHRWFI120
EALAAEPGSE  ARSRYIFRDG  KGVNGELPPN  NWPSVFGGPA  WTRVTEPDGT  PGQWYLHLFA180
PEQPDVNWDN  PEVFDDFAET  LRFWLDRGID  GFRLDVAHGM  AKPPGLPDIE  DTETSMLHIA240
DEDPRFNNEG  VHEYHREIRK  VLDQYRDVVA  VGEIWVNDNT  RFAEYVRPDE  LHLGFNFKLV300
EADFDADKIR  AAIENSLAAV  DSVGATPTWT  LSNHDVEREV  TRYGNGQIGQ  WRARAMALVM360
LALPGTVFIY  NGSELGLPNV  DLPDEALQDP  VWERSGHTER  GRDGCRVPIP  WEGTDPPYGF420
SSNDQTWLPM  PHGWADFTVE  SQLEQADSTL  SLYRRAIELR  KNRKEFNGTS  LEWYGSPPGA480
LAFRVKGGGL  TCALNVSSDL  VDLPAGEVIL  TSGPLVNGKL  PRNTAAWIV529

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help