CAZyme3D

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Entry ID

Information for CAZyme ID: AJH21471.1

Basic Information

GenBank IDAJH21471.1
FamilyAA10, CBM5
Sequence Length458
UniProt IDA0A0B5S7X1(100,100)Download
Average pLDDT?85.67
CAZy50 ID78053
CAZy50 RepNo, AJG91237.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1405
KingdomBacteria
PhylumBacillota
ClassBacilli
OrderBacillales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus mycoides

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MNLKLTSKLE  RLRKSKKGIG  ACVLAAGVTA  ITMIPQSAYA  HGFVEKPSSR  AALCSQNYGA60
LNLNCGNVMY  EPQSLEAPKG  FPDGGPIDGK  IASAGGLFGG  ILDQQTSNRW  FKNTIKGGAN120
TFTWKYTAAH  STSKWHYYIT  KKGWDPNKPL  TRAELEPIGT  VKHDGSAASN  NLTHTINVPT180
DRNGYHVILA  VWDVADTSNA  FYNVIDVNLV  NNEAPDTVAP  SQPTGLNASK  VSANSVELTW240
KASTDNIGVK  EYQVLRNGEV  IDTVPGTTFI  DKKLKANTEY  TYTIKALDSA  GNISKESEKL300
KVKTTNAIPD  IEAPTQPKGL  HSMGTTATTV  DLMWSPSEDN  VGVDHYVVYR  ENAGVMNKIG360
TTDNTSFVDK  NLKANTSYKY  VVTAVDLARN  ESSRSDVLTV  ATKLDGSTYE  KWDARKAYNK420
GDKVVHEGKV  YEAVQSYQGN  GDPNWIFALS  IWKPVLNK458

Predicted 3D structure by AlphaFold2 with pLDDT = 85.67 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : AA10(41-208)+CBM5(409-440)

MNLKLTSKLE  RLRKSKKGIG  ACVLAAGVTA  ITMIPQSAYA  HGFVEKPSSR  AALCSQNYGA60
LNLNCGNVMY  EPQSLEAPKG  FPDGGPIDGK  IASAGGLFGG  ILDQQTSNRW  FKNTIKGGAN120
TFTWKYTAAH  STSKWHYYIT  KKGWDPNKPL  TRAELEPIGT  VKHDGSAASN  NLTHTINVPT180
DRNGYHVILA  VWDVADTSNA  FYNVIDVNLV  NNEAPDTVAP  SQPTGLNASK  VSANSVELTW240
KASTDNIGVK  EYQVLRNGEV  IDTVPGTTFI  DKKLKANTEY  TYTIKALDSA  GNISKESEKL300
KVKTTNAIPD  IEAPTQPKGL  HSMGTTATTV  DLMWSPSEDN  VGVDHYVVYR  ENAGVMNKIG360
TTDNTSFVDK  NLKANTSYKY  VVTAVDLARN  ESSRSDVLTV  ATKLDGSTYE  KWDARKAYNK420
GDKVVHEGKV  YEAVQSYQGN  GDPNWIFALS  IWKPVLNK458

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help