Information for CAZyme ID: AJE21015.1
Basic Information
GenBank ID | AJE21015.1 |
Family | GH50 |
Sequence Length | 797 |
UniProt ID | A0A0C4WND5(100,100)![]() |
Average pLDDT? | 88.22 |
CAZy50 ID | 23549 |
CAZy50 Rep | No, SDT65454.1 |
Structure Cluster | - |
EC Number(s) | - |
Substrates(s) | - |
Taxonomy
Tax ID | 1328314 |
Kingdom | Bacteria |
Phylum | Pseudomonadota |
Class | Gammaproteobacteria |
Order | Pseudomonadales |
Family | Pseudomonadaceae |
Genus | Azotobacter |
Species | Azotobacter chroococcum |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
MIRPLVSLLF ACCLVPLSAQ AADEQVLFNF VRPTDVVQVK GEGAFLPELT AESVAGGELL | 60 |
RRVTFNPQEG PSLRLTPQQG SWDWSGAGAV SLRIQNAMDW ALTLQVSIES ADGKLLKTLV | 120 |
ALPAGPAQTL VLPLHASSPR AQGMRAAPPM PWTHDNQRLL VATSLEGEID LRQVKAVTLS | 180 |
LEKPDVQQSI LLGRFGVRED LEPEVYRGIV DAYGQYSRVE WPEKITSDKQ LKAAAEQEQA | 240 |
QLGRWLAERP QLDRFGGWLK GPQLEATGFF RVARHEGRWY LVTPEGHPFF SLGVNTVSSG | 300 |
NSRTYIEGRE GMFLDLPGKD APLGAFYGAG DSRQATGANG GRQFAHGRWY DFYRANLYRT | 360 |
YGQSCTPAGA QAATEAEIVE PERAPPEAPA AEAPASPAAV APVAGQPAAA PPCVTQFFDA | 420 |
QRWRGHTLER LQAWGFNTLG NWSDLALGTM RRVPYTIPLL IRGDYATIST GHDWWGGMPD | 480 |
PFDPRFAMAA ERAIAIATRD HRNNPWVVGY FADNELSWAA PGTDPKSRYA LAYGTLRQTT | 540 |
DVPAKRAFLK LLRDRYRNQQ GLSAAWGIEL PAWELMEDPG FEAPLPSPEH PAIEEDLQRF | 600 |
QQLFADTYFK TIAESLKWHA PDHLLLGGRF AISTPEAVAA CARYCDVLSF NFYTREPQHG | 660 |
YDFEALRALD KPVLVSEFHF GSRDRGPFWG GVAEVYKEEE RGPAYAHFLE RALAEPSIVG | 720 |
VHWFQYLDQP VTGRLLDGEN GHIGLVGVTD RPFSGFVESV RKANLKVGSL LESAAAPAAG | 780 |
KPAAEGGARS ETPAKAP | 797 |
Predicted 3D structure by AlphaFold2 with pLDDT = 88.22 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH50(76-767)
MIRPLVSLLF ACCLVPLSAQ AADEQVLFNF VRPTDVVQVK GEGAFLPELT AESVAGGELL | 60 |
RRVTFNPQEG PSLRLTPQQG SWDWSGAGAV SLRIQNAMDW ALTLQVSIES ADGKLLKTLV | 120 |
ALPAGPAQTL VLPLHASSPR AQGMRAAPPM PWTHDNQRLL VATSLEGEID LRQVKAVTLS | 180 |
LEKPDVQQSI LLGRFGVRED LEPEVYRGIV DAYGQYSRVE WPEKITSDKQ LKAAAEQEQA | 240 |
QLGRWLAERP QLDRFGGWLK GPQLEATGFF RVARHEGRWY LVTPEGHPFF SLGVNTVSSG | 300 |
NSRTYIEGRE GMFLDLPGKD APLGAFYGAG DSRQATGANG GRQFAHGRWY DFYRANLYRT | 360 |
YGQSCTPAGA QAATEAEIVE PERAPPEAPA AEAPASPAAV APVAGQPAAA PPCVTQFFDA | 420 |
QRWRGHTLER LQAWGFNTLG NWSDLALGTM RRVPYTIPLL IRGDYATIST GHDWWGGMPD | 480 |
PFDPRFAMAA ERAIAIATRD HRNNPWVVGY FADNELSWAA PGTDPKSRYA LAYGTLRQTT | 540 |
DVPAKRAFLK LLRDRYRNQQ GLSAAWGIEL PAWELMEDPG FEAPLPSPEH PAIEEDLQRF | 600 |
QQLFADTYFK TIAESLKWHA PDHLLLGGRF AISTPEAVAA CARYCDVLSF NFYTREPQHG | 660 |
YDFEALRALD KPVLVSEFHF GSRDRGPFWG GVAEVYKEEE RGPAYAHFLE RALAEPSIVG | 720 |
VHWFQYLDQP VTGRLLDGEN GHIGLVGVTD RPFSGFVESV RKANLKVGSL LESAAAPAAG | 780 |
KPAAEGGARS ETPAKAP | 797 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.