CAZyme3D

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Entry ID

Information for CAZyme ID: AJE11232.1

Basic Information

GenBank IDAJE11232.1
FamilyGT2
Sequence Length633
UniProt IDA0A0E1KYE3(100,100)Download
Average pLDDT?89.90
CAZy50 ID46583
CAZy50 RepNo, ACO86968.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1408283
KingdomBacteria
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium botulinum

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MKLSIAMMVK  NESKYLDKSL  SSLKPVLEAV  SSELIIVDTG  STDNTVEIAK  KYTDKLYFHN60
WNNDFSDMRN  ITIDYCSGEW  IFIIDGDEVL  EEPQSIIDAL  TLKLDKGYNT  LFIRVKSLHS120
EYDLNSYSIL  TSPRIFKNDG  NFKYEGKVHN  QPIHKEPSLL  LNSEILHYGY  VTNDPELMER180
KFKRTASILK  SELEKEPNNI  YYLYQLGKSY  YLHKDLQQSI  EQYEKAYKIL  DKKKLKKNFG240
QLYMPFALAY  STNKQYKEAI  KICKEGIKLF  EGYLDLYYII  ANSLEALGDL  EEAFYYYKEF300
IKVYEDFYNY  KISQDPAITI  EYRNNSYKDV  VLTKLSERNV  NLNKYEEALK  YAINIENEQN360
KIIHLIEIYI  KIHQYTRIKD  LYFEIKEENK  NLFVNKLEDK  MKLMTKEEKD  QIKNIFSNGE420
EEYFKLNQFR  LKNPKEKDTD  RLLKEIDFDK  VPSFYGEMIL  NKWDNKALVF  SVLKRLQNNT480
LQNIFQWMIK  QNIQVYWKDE  VEKEILDLEL  EKLDIHKTRI  YAILTKVILL  NKMELYKITK540
NNIDKKYNDI  FKIYMELYIN  YIEFIYNVDK  SRLFYKNLEA  SEKQMFSIIF  AREAYESGKY600
SLAVKYFKEA  AEQYPYLADL  LGNYSSELLK  EVL633

Predicted 3D structure by AlphaFold2 with pLDDT = 89.90 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT2(4-92)

MKLSIAMMVK  NESKYLDKSL  SSLKPVLEAV  SSELIIVDTG  STDNTVEIAK  KYTDKLYFHN60
WNNDFSDMRN  ITIDYCSGEW  IFIIDGDEVL  EEPQSIIDAL  TLKLDKGYNT  LFIRVKSLHS120
EYDLNSYSIL  TSPRIFKNDG  NFKYEGKVHN  QPIHKEPSLL  LNSEILHYGY  VTNDPELMER180
KFKRTASILK  SELEKEPNNI  YYLYQLGKSY  YLHKDLQQSI  EQYEKAYKIL  DKKKLKKNFG240
QLYMPFALAY  STNKQYKEAI  KICKEGIKLF  EGYLDLYYII  ANSLEALGDL  EEAFYYYKEF300
IKVYEDFYNY  KISQDPAITI  EYRNNSYKDV  VLTKLSERNV  NLNKYEEALK  YAINIENEQN360
KIIHLIEIYI  KIHQYTRIKD  LYFEIKEENK  NLFVNKLEDK  MKLMTKEEKD  QIKNIFSNGE420
EEYFKLNQFR  LKNPKEKDTD  RLLKEIDFDK  VPSFYGEMIL  NKWDNKALVF  SVLKRLQNNT480
LQNIFQWMIK  QNIQVYWKDE  VEKEILDLEL  EKLDIHKTRI  YAILTKVILL  NKMELYKITK540
NNIDKKYNDI  FKIYMELYIN  YIEFIYNVDK  SRLFYKNLEA  SEKQMFSIIF  AREAYESGKY600
SLAVKYFKEA  AEQYPYLADL  LGNYSSELLK  EVL633

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help