Information for CAZyme ID: AJC82001.1
Basic Information
| GenBank ID | AJC82001.1 |
| Family | GH94 |
| Sequence Length | 1095 |
| UniProt ID | A0A7U4L8F8(100,100) |
| Average pLDDT? | 94.42 |
| CAZy50 ID | 10416 |
| CAZy50 Rep | No, QEN88792.1 |
| Structure Cluster | - |
| EC Number(s) | - |
| Substrates(s) | - |
Taxonomy
| Tax ID | 1432049 |
| Kingdom | Bacteria |
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Rhizobium |
| Species | Rhizobium etli |
Protein Sequence: 90 < plddt <=100; 70 < plddt <= 90; 50 < plddt <= 70; 0 <= plddt <= 50; Download help
| MSPDFTRSLQ MPRREELGLF AISNGSGLSI SALPNGTLFA IEYADDKGAV QINQIQGSPL | 60 |
| IGGIGRLYLR VGGARPDVVE IVGPRAKGSF ACDATSFSWS GKAGDIAYEV RLALHPSETA | 120 |
| WFWRASIRHL KEGTLPADLV LIQDVGLGDR GFLMNSEAYA SQYVDHHIAD HKAYGCVVIN | 180 |
| RQNLKQSGGR NPWLAQGCLD GAVAYATDAI QLVQAKDRLD DLLVGTFGTR LPSERRQQET | 240 |
| ACPAIQSRSL SVTPDGATAS FFALFAADHP EASSDADLSR LDGIELPDDA AARLETAAPV | 300 |
| RSLLQDAPLL KVETLDKKTI GRLYPERSLE ERGHGKLLSF FVPDGALNRH VVLRDKELVV | 360 |
| ARRHGAIVRS GQNMLLDDAT LAATCWMQGI FAAQLTIGNT SFHKLFSVSR DPYNLTRASG | 420 |
| LRIMADLGAG WQLLAVPSAF EMGLSDCRWI YQCAAHTIIV TAAASGEDAA MRWSIHVEGK | 480 |
| PCRFLVFGHV VLGEREYDAG GQIDFDPARK RVSFRPDPAW LWGERYPEAV YWLVSSTPDA | 540 |
| VEEIGGDELL YTDGLARNGA FVALRSRPTQ ALSIAVVGSM TNADDAERLA QRYEAGINEE | 600 |
| AMLLPASTFW RNAVRGIGID SASPDLAAQA TLLPWLAHDA IVHLSVPHGL EQYTGAAWGT | 660 |
| RDACQGPIEF LLAYEHDREA RQVLKTVFSE QYLDKGDWPQ WFMLEPYANI RAGDCHGDII | 720 |
| VWPLKALCDY IEATGDLAIL DEKVSWRDEK TMQKAPQADT IAIHVEKLLD TVRERFIPGT | 780 |
| HLIRYGEGDW NDSLQPADPH LRDWMVSSWT VALLYEQIVR YSAIRRRLGH KGKAKALSKI | 840 |
| ATAMRRDFNR HLVRDGVVAG YGIFDPAHDG VELLLHPSDT RTGLSFSLIA MTQAMLGKLF | 900 |
| TPAQRRDHMR LIEEHLLFPD GVRLMERPAT YAGGPETLFR RAESSSFFGR EIGLMYVHAH | 960 |
| LRYCEALALD AAADALWEAI AVVNAISVTK ALPQASLRQR NTYFSSSDAA FPDRYKAADD | 1020 |
| WARVKAGKIA VDGGWRIYSS GPGLYTRSFV ENILGFKRRY GRRSRKPLLP AAHAALDLRT | 1080 |
| DHAGWRRLMK PKPQM | 1095 |
Predicted 3D structure by AlphaFold2 with pLDDT = 94.42 ; Download help
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .
Residues were colored according to plddt ( blue-> high quality; red-> low quality ).
Carbohydrate binding residues Predicted by CAPSIF
Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).
Full Sequence: AA; CE; PL; GH; GT; CBM; Download structure help
dbCAN3 predicted domain(s) : GH94(114-1080)
| MSPDFTRSLQ MPRREELGLF AISNGSGLSI SALPNGTLFA IEYADDKGAV QINQIQGSPL | 60 |
| IGGIGRLYLR VGGARPDVVE IVGPRAKGSF ACDATSFSWS GKAGDIAYEV RLALHPSETA | 120 |
| WFWRASIRHL KEGTLPADLV LIQDVGLGDR GFLMNSEAYA SQYVDHHIAD HKAYGCVVIN | 180 |
| RQNLKQSGGR NPWLAQGCLD GAVAYATDAI QLVQAKDRLD DLLVGTFGTR LPSERRQQET | 240 |
| ACPAIQSRSL SVTPDGATAS FFALFAADHP EASSDADLSR LDGIELPDDA AARLETAAPV | 300 |
| RSLLQDAPLL KVETLDKKTI GRLYPERSLE ERGHGKLLSF FVPDGALNRH VVLRDKELVV | 360 |
| ARRHGAIVRS GQNMLLDDAT LAATCWMQGI FAAQLTIGNT SFHKLFSVSR DPYNLTRASG | 420 |
| LRIMADLGAG WQLLAVPSAF EMGLSDCRWI YQCAAHTIIV TAAASGEDAA MRWSIHVEGK | 480 |
| PCRFLVFGHV VLGEREYDAG GQIDFDPARK RVSFRPDPAW LWGERYPEAV YWLVSSTPDA | 540 |
| VEEIGGDELL YTDGLARNGA FVALRSRPTQ ALSIAVVGSM TNADDAERLA QRYEAGINEE | 600 |
| AMLLPASTFW RNAVRGIGID SASPDLAAQA TLLPWLAHDA IVHLSVPHGL EQYTGAAWGT | 660 |
| RDACQGPIEF LLAYEHDREA RQVLKTVFSE QYLDKGDWPQ WFMLEPYANI RAGDCHGDII | 720 |
| VWPLKALCDY IEATGDLAIL DEKVSWRDEK TMQKAPQADT IAIHVEKLLD TVRERFIPGT | 780 |
| HLIRYGEGDW NDSLQPADPH LRDWMVSSWT VALLYEQIVR YSAIRRRLGH KGKAKALSKI | 840 |
| ATAMRRDFNR HLVRDGVVAG YGIFDPAHDG VELLLHPSDT RTGLSFSLIA MTQAMLGKLF | 900 |
| TPAQRRDHMR LIEEHLLFPD GVRLMERPAT YAGGPETLFR RAESSSFFGR EIGLMYVHAH | 960 |
| LRYCEALALD AAADALWEAI AVVNAISVTK ALPQASLRQR NTYFSSSDAA FPDRYKAADD | 1020 |
| WARVKAGKIA VDGGWRIYSS GPGLYTRSFV ENILGFKRRY GRRSRKPLLP AAHAALDLRT | 1080 |
| DHAGWRRLMK PKPQM | 1095 |
Predicted CAZyme domains from dbCAN; Download help
Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)
dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.
Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)
For more details, please see dbCAN3.