CAZyme3D

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Entry ID

Information for CAZyme ID: AIZ41013.1

Basic Information

GenBank IDAIZ41013.1
FamilyGT51
Sequence Length782
UniProt IDA0A0A7K933(100,100)Download
Average pLDDT?88.96
CAZy50 ID28542
CAZy50 RepNo, WGD35714.1
Structure Cluster-
EC Number(s)-
Substrates(s)-

Taxonomy

Tax ID1348584
KingdomBacteria
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusCellulophaga
SpeciesCellulophaga baltica

Protein Sequence:
90 < plddt <=100;
70 < plddt <= 90;
50 < plddt <= 70;
0 <= plddt <= 50;     Download help

MARAPKKKQK  NNFFKFIKWF  WILFLTGLLS  VVLIFLAASW  DWFGELPTFE  RLENPQTNLA60
TEIISSDGET  LGKYYLDDNR  TPIPFEELPK  NLVDALVATE  DARYFEHSGV  DARGTLRAFA120
YLGSKGGAST  ISQQLAKQLF  TGTAARGWGR  YTQKIKEWVI  ATRLERQYTK  EEIIAMYFNI180
YDFGNNADGI  RSAAKIYFTK  EPKDLNVSES  AMLVGMFKNS  SLYNPRPKRN  PEGTKNRRDV240
VLAQMAKYEF  ISEKVKDSLQ  KLPLGLRYSP  ESHSDGLGTY  FRMHLQSFLN  QWISKNPKPA300
LKGERDKWNI  YLDGLKVYTT  VDSRMQQNAE  DAVQEHMKNL  QAEFFKQNTP  ERNKTAPFLD360
INTKEINSIM  ERGMKVSDRW  RKMKKLGKSE  KEIRASFKEP  TPMVVFDWNS  EGNEKDTIMT420
PLDSIRYYKS  FLRTAMMSME  PQTGHVKAWV  GGLNYKHFQY  DNVIQGARQA  GSTFKPFVYA480
AAIDQLRLSP  CETLYDDEYC  IEAGKHGNQE  AWCPKNSDGK  YTLKNMSLKT  ALAGSVNTVT540
AQLMDKVGPK  PVVAMAKNMG  ISRDIPEVPS  IALGTADVNV  YEMVGAFGTF  ANEGVYVKPV600
LVTRIEDKNG  TVLYEYVPET  RDVMSKDVAY  AMVDLMQGVV  QSGSGGRLRH  SYAKNNAVYK660
EVVTGYPYNL  TNPIAGKTGT  TQKNSDGWFM  GMVPNLVTGV  WVGGEERATH  FNRTAYGQGA720
SMALPIWGLY  MVKNYANKEL  DISDGNFKKP  SGMSIELDCS  KFQDDKKDST  SPEEDDLDDL780
DF782

Predicted 3D structure by AlphaFold2 with pLDDT = 88.96 ; Download help

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Carbohydrate binding residues Predicted by CAPSIF

Binding site residues are not predicted, since this is not a representative ID (CAZyme3D-ID50).

Full Sequence:
AA;
CE;
PL;
GH;
GT;
CBM;     Download structure help

dbCAN3 predicted domain(s) : GT51(67-245)

MARAPKKKQK  NNFFKFIKWF  WILFLTGLLS  VVLIFLAASW  DWFGELPTFE  RLENPQTNLA60
TEIISSDGET  LGKYYLDDNR  TPIPFEELPK  NLVDALVATE  DARYFEHSGV  DARGTLRAFA120
YLGSKGGAST  ISQQLAKQLF  TGTAARGWGR  YTQKIKEWVI  ATRLERQYTK  EEIIAMYFNI180
YDFGNNADGI  RSAAKIYFTK  EPKDLNVSES  AMLVGMFKNS  SLYNPRPKRN  PEGTKNRRDV240
VLAQMAKYEF  ISEKVKDSLQ  KLPLGLRYSP  ESHSDGLGTY  FRMHLQSFLN  QWISKNPKPA300
LKGERDKWNI  YLDGLKVYTT  VDSRMQQNAE  DAVQEHMKNL  QAEFFKQNTP  ERNKTAPFLD360
INTKEINSIM  ERGMKVSDRW  RKMKKLGKSE  KEIRASFKEP  TPMVVFDWNS  EGNEKDTIMT420
PLDSIRYYKS  FLRTAMMSME  PQTGHVKAWV  GGLNYKHFQY  DNVIQGARQA  GSTFKPFVYA480
AAIDQLRLSP  CETLYDDEYC  IEAGKHGNQE  AWCPKNSDGK  YTLKNMSLKT  ALAGSVNTVT540
AQLMDKVGPK  PVVAMAKNMG  ISRDIPEVPS  IALGTADVNV  YEMVGAFGTF  ANEGVYVKPV600
LVTRIEDKNG  TVLYEYVPET  RDVMSKDVAY  AMVDLMQGVV  QSGSGGRLRH  SYAKNNAVYK660
EVVTGYPYNL  TNPIAGKTGT  TQKNSDGWFM  GMVPNLVTGV  WVGGEERATH  FNRTAYGQGA720
SMALPIWGLY  MVKNYANKEL  DISDGNFKKP  SGMSIELDCS  KFQDDKKDST  SPEEDDLDDL780
DF782

Predicted CAZyme domains from dbCAN; Download help

Domains were colored according to CAZyme classification: (AA), (CE), (PL), (GH), (GT), (CBM), & (Null)

dbCAN3 server is a web server for automated Carbohydrate-active enzyme ANnotation.

Details:
dbCAN3 server integrates three state-of-the-art tools/databases for automated CAZyme annotation:
⋆HMMER search for CAZyme family annotation vs. dbCAN CAZyme domain HMM database
⋆DIAMOND search for BLAST hits in the CAZy database
⋆HMMER search for CAZyme subfamily annotation vs. dbCAN-sub HMM database of CAZyme subfamilies (derived from eCAMI classification of CAZyDB families)

For more details, please see dbCAN3.

Similarites between the same cluster seqeunces from DIAMOND; Download help